Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup88Q8CEC0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.37■□□□□ 0.69
Nup88Q8CEC0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.37■□□□□ 0.69
Nup88Q8CEC0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Nup88Q8CEC0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.37■□□□□ 0.69
Nup88Q8CEC0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup88Q8CEC0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Nup88Q8CEC0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup88Q8CEC0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup88Q8CEC0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup88Q8CEC0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup88Q8CEC0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup88Q8CEC0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nup88Q8CEC0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup88Q8CEC0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.36■□□□□ 0.69
Nup88Q8CEC0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup88Q8CEC0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nup88Q8CEC0 Gm7213-201ENSMUST00000215977 950 ntBASIC19.36■□□□□ 0.69
Nup88Q8CEC0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nup88Q8CEC0 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.36■□□□□ 0.69
Nup88Q8CEC0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nup88Q8CEC0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup88Q8CEC0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nup88Q8CEC0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup88Q8CEC0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup88Q8CEC0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup88Q8CEC0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nup88Q8CEC0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup88Q8CEC0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.34■□□□□ 0.69
Nup88Q8CEC0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup88Q8CEC0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Nup88Q8CEC0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup88Q8CEC0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Nup88Q8CEC0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nup88Q8CEC0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup88Q8CEC0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup88Q8CEC0 Gm7284-201ENSMUST00000131667 944 ntBASIC19.34■□□□□ 0.69
Nup88Q8CEC0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup88Q8CEC0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Nup88Q8CEC0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Nup88Q8CEC0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup88Q8CEC0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup88Q8CEC0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nup88Q8CEC0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nup88Q8CEC0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nup88Q8CEC0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.33■□□□□ 0.69
Nup88Q8CEC0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Nup88Q8CEC0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup88Q8CEC0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Nup88Q8CEC0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nup88Q8CEC0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup88Q8CEC0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup88Q8CEC0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup88Q8CEC0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Nup88Q8CEC0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nup88Q8CEC0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nup88Q8CEC0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup88Q8CEC0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup88Q8CEC0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup88Q8CEC0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup88Q8CEC0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup88Q8CEC0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup88Q8CEC0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.32■□□□□ 0.68
Nup88Q8CEC0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup88Q8CEC0 Gm27704-201ENSMUST00000185094 107 ntBASIC19.32■□□□□ 0.68
Nup88Q8CEC0 Gm29518-201ENSMUST00000190858 372 ntBASIC19.32■□□□□ 0.68
Nup88Q8CEC0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup88Q8CEC0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.32■□□□□ 0.68
Nup88Q8CEC0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup88Q8CEC0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms