Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptcd1Q8C2E4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ptcd1Q8C2E4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ptcd1Q8C2E4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ptcd1Q8C2E4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.16■□□□□ 0.82
Ptcd1Q8C2E4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.16■□□□□ 0.82
Ptcd1Q8C2E4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.16■□□□□ 0.82
Ptcd1Q8C2E4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.16■□□□□ 0.82
Ptcd1Q8C2E4 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.16■□□□□ 0.82
Ptcd1Q8C2E4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.16■□□□□ 0.82
Ptcd1Q8C2E4 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.16■□□□□ 0.82
Ptcd1Q8C2E4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ptcd1Q8C2E4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ptcd1Q8C2E4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.16■□□□□ 0.82
Ptcd1Q8C2E4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ptcd1Q8C2E4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.16■□□□□ 0.82
Ptcd1Q8C2E4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ptcd1Q8C2E4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ptcd1Q8C2E4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ptcd1Q8C2E4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 Gm24513-201ENSMUST00000174964 138 ntBASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 Gm27397-201ENSMUST00000184997 107 ntBASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 Gm15590-201ENSMUST00000078419 552 ntBASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.15■□□□□ 0.82
Ptcd1Q8C2E4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ptcd1Q8C2E4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ptcd1Q8C2E4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptcd1Q8C2E4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptcd1Q8C2E4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptcd1Q8C2E4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ptcd1Q8C2E4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Ptcd1Q8C2E4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptcd1Q8C2E4 Gm15173-201ENSMUST00000122049 433 ntBASIC20.14■□□□□ 0.81
Ptcd1Q8C2E4 Gm44430-201ENSMUST00000203376 995 ntBASIC20.14■□□□□ 0.81
Ptcd1Q8C2E4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ptcd1Q8C2E4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptcd1Q8C2E4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptcd1Q8C2E4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptcd1Q8C2E4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptcd1Q8C2E4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ptcd1Q8C2E4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ptcd1Q8C2E4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ptcd1Q8C2E4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ptcd1Q8C2E4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Ptcd1Q8C2E4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ptcd1Q8C2E4 Gm14494-201ENSMUST00000118786 435 ntBASIC20.13■□□□□ 0.81
Ptcd1Q8C2E4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.13■□□□□ 0.81
Ptcd1Q8C2E4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.13■□□□□ 0.81
Ptcd1Q8C2E4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Ptcd1Q8C2E4 AC154222.1-201ENSMUST00000223882 475 ntBASIC20.13■□□□□ 0.81
Ptcd1Q8C2E4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Ptcd1Q8C2E4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ptcd1Q8C2E4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ptcd1Q8C2E4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ptcd1Q8C2E4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms