Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Gm11355-201ENSMUST00000121120 306 ntBASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Gm36967-201ENSMUST00000193814 266 ntBASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trub1Q8C0D0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trub1Q8C0D0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trub1Q8C0D0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trub1Q8C0D0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trub1Q8C0D0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trub1Q8C0D0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trub1Q8C0D0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms