Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Mir1938-201ENSMUST00000158746 100 ntBASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Gm44430-201ENSMUST00000203376 995 ntBASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Chd9Q8BYH8 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Mir8112-201ENSMUST00000184382 131 ntBASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Chd9Q8BYH8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Gm44492-201ENSMUST00000197012 141 ntBASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd9Q8BYH8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Gm6912-201ENSMUST00000117218 544 ntBASIC12.85□□□□□ -0.35
Chd9Q8BYH8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Mir7085-201ENSMUST00000184353 66 ntBASIC12.85□□□□□ -0.35
Chd9Q8BYH8 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.85□□□□□ -0.35
Chd9Q8BYH8 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.85□□□□□ -0.35
Chd9Q8BYH8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Gm17271-201ENSMUST00000165535 355 ntBASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms