Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trerf1Q8BXJ2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trerf1Q8BXJ2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trerf1Q8BXJ2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trerf1Q8BXJ2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trerf1Q8BXJ2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.33■□□□□ 0.36
Trerf1Q8BXJ2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trerf1Q8BXJ2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trerf1Q8BXJ2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trerf1Q8BXJ2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Gm45058-201ENSMUST00000205810 766 ntBASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trerf1Q8BXJ2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 Prob1-201ENSMUST00000097619 3021 ntBASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trerf1Q8BXJ2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trerf1Q8BXJ2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trerf1Q8BXJ2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms