Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Gm34391-201ENSMUST00000203706 907 ntBASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Birc2-201ENSMUST00000054878 378 ntBASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cdk5rap1Q8BTW8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.55■□□□□ 0.08
Cdk5rap1Q8BTW8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cdk5rap1Q8BTW8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk5rap1Q8BTW8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdk5rap1Q8BTW8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Cdk5rap1Q8BTW8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdk5rap1Q8BTW8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdk5rap1Q8BTW8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms