Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.41■□□□□ 0.06
Clrn3Q8BHH8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.41■□□□□ 0.06
Clrn3Q8BHH8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn3Q8BHH8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.39■□□□□ 0.06
Clrn3Q8BHH8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Gm13186-201ENSMUST00000118031 316 ntBASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn3Q8BHH8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Actl10-202ENSMUST00000226583 1501 ntBASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Gm18115-201ENSMUST00000221209 621 ntBASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.38■□□□□ 0.05
Clrn3Q8BHH8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms