Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Gm6345-202ENSMUST00000180900 204 ntBASIC16.18■□□□□ 0.18
Ubp1Q811S7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.18■□□□□ 0.18
Ubp1Q811S7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Gm6623-201ENSMUST00000173570 544 ntBASIC16.17■□□□□ 0.18
Ubp1Q811S7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ubp1Q811S7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.16■□□□□ 0.18
Ubp1Q811S7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Gm29707-201ENSMUST00000196325 491 ntBASIC16.16■□□□□ 0.18
Ubp1Q811S7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.16■□□□□ 0.18
Ubp1Q811S7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubp1Q811S7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms