Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Mir6349-201ENSMUST00000184059 97 ntBASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm3Q80WV7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Gm13158-201ENSMUST00000122007 736 ntBASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm3Q80WV7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Gm44549-201ENSMUST00000208351 577 ntBASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Srrm3Q80WV7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Gm30025-201ENSMUST00000218555 728 ntBASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm3Q80WV7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms