Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rpap1Q80TE0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rpap1Q80TE0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rpap1Q80TE0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Rpap1Q80TE0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
Rpap1Q80TE0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC25.33■■□□□ 1.65
Rpap1Q80TE0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Rpap1Q80TE0 Gm8784-201ENSMUST00000222096 1435 ntBASIC25.33■■□□□ 1.65
Rpap1Q80TE0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Rpap1Q80TE0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rpap1Q80TE0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rpap1Q80TE0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rpap1Q80TE0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rpap1Q80TE0 Gm37811-201ENSMUST00000192416 2601 ntBASIC25.32■■□□□ 1.64
Rpap1Q80TE0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rpap1Q80TE0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
Rpap1Q80TE0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rpap1Q80TE0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Rpap1Q80TE0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Rpap1Q80TE0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rpap1Q80TE0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC25.32■■□□□ 1.64
Rpap1Q80TE0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Rpap1Q80TE0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC25.32■■□□□ 1.64
Rpap1Q80TE0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rpap1Q80TE0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rpap1Q80TE0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rpap1Q80TE0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rpap1Q80TE0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rpap1Q80TE0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC25.31■■□□□ 1.64
Rpap1Q80TE0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Rpap1Q80TE0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rpap1Q80TE0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rpap1Q80TE0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
Rpap1Q80TE0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rpap1Q80TE0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Rpap1Q80TE0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rpap1Q80TE0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC25.3■■□□□ 1.64
Rpap1Q80TE0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC25.3■■□□□ 1.64
Rpap1Q80TE0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rpap1Q80TE0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rpap1Q80TE0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rpap1Q80TE0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rpap1Q80TE0 Gm18622-201ENSMUST00000219361 595 ntBASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Gm15920-201ENSMUST00000118998 402 ntBASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Gm5253-201ENSMUST00000187104 1025 ntBASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC25.29■■□□□ 1.64
Rpap1Q80TE0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Rpap1Q80TE0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rpap1Q80TE0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rpap1Q80TE0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rpap1Q80TE0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Rpap1Q80TE0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC25.28■■□□□ 1.64
Rpap1Q80TE0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rpap1Q80TE0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rpap1Q80TE0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rpap1Q80TE0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
Rpap1Q80TE0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Rpap1Q80TE0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC25.28■■□□□ 1.64
Rpap1Q80TE0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC25.28■■□□□ 1.64
Rpap1Q80TE0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rpap1Q80TE0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Rpap1Q80TE0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Rpap1Q80TE0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rpap1Q80TE0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Rpap1Q80TE0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Rpap1Q80TE0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC25.27■■□□□ 1.64
Rpap1Q80TE0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Rpap1Q80TE0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Rpap1Q80TE0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
Rpap1Q80TE0 Gm2308-201ENSMUST00000166539 1004 ntBASIC25.27■■□□□ 1.64
Rpap1Q80TE0 AC158982.1-201ENSMUST00000228377 901 ntBASIC25.27■■□□□ 1.64
Rpap1Q80TE0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Rpap1Q80TE0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC25.26■■□□□ 1.63
Rpap1Q80TE0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rpap1Q80TE0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rpap1Q80TE0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC25.26■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms