Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.76■□□□□ 0.75
Sned1Q70E20 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.76■□□□□ 0.75
Sned1Q70E20 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sned1Q70E20 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sned1Q70E20 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sned1Q70E20 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sned1Q70E20 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sned1Q70E20 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.75■□□□□ 0.75
Sned1Q70E20 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.75■□□□□ 0.75
Sned1Q70E20 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sned1Q70E20 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.75■□□□□ 0.75
Sned1Q70E20 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.75■□□□□ 0.75
Sned1Q70E20 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.75■□□□□ 0.75
Sned1Q70E20 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sned1Q70E20 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sned1Q70E20 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sned1Q70E20 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sned1Q70E20 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sned1Q70E20 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sned1Q70E20 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sned1Q70E20 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Sned1Q70E20 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sned1Q70E20 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sned1Q70E20 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Sned1Q70E20 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sned1Q70E20 Gm8344-201ENSMUST00000119813 856 ntBASIC19.74■□□□□ 0.75
Sned1Q70E20 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Sned1Q70E20 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC19.74■□□□□ 0.75
Sned1Q70E20 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sned1Q70E20 Mir6990-201ENSMUST00000183724 91 ntBASIC19.74■□□□□ 0.75
Sned1Q70E20 Gm5745-201ENSMUST00000183748 313 ntBASIC19.74■□□□□ 0.75
Sned1Q70E20 Gm43474-201ENSMUST00000196415 774 ntBASIC19.74■□□□□ 0.75
Sned1Q70E20 AC131187.1-201ENSMUST00000224567 809 ntBASIC19.74■□□□□ 0.75
Sned1Q70E20 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC19.74■□□□□ 0.75
Sned1Q70E20 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sned1Q70E20 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sned1Q70E20 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sned1Q70E20 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sned1Q70E20 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.73■□□□□ 0.75
Sned1Q70E20 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sned1Q70E20 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sned1Q70E20 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sned1Q70E20 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sned1Q70E20 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sned1Q70E20 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sned1Q70E20 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sned1Q70E20 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.73■□□□□ 0.75
Sned1Q70E20 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sned1Q70E20 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.73■□□□□ 0.75
Sned1Q70E20 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sned1Q70E20 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sned1Q70E20 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sned1Q70E20 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sned1Q70E20 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.73■□□□□ 0.75
Sned1Q70E20 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sned1Q70E20 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.73■□□□□ 0.75
Sned1Q70E20 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sned1Q70E20 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Sned1Q70E20 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Sned1Q70E20 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.72■□□□□ 0.75
Sned1Q70E20 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Sned1Q70E20 Gm23547-201ENSMUST00000158210 271 ntBASIC19.72■□□□□ 0.75
Sned1Q70E20 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sned1Q70E20 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sned1Q70E20 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.72■□□□□ 0.75
Sned1Q70E20 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sned1Q70E20 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.72■□□□□ 0.75
Sned1Q70E20 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.71■□□□□ 0.75
Sned1Q70E20 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sned1Q70E20 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.71■□□□□ 0.75
Sned1Q70E20 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sned1Q70E20 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sned1Q70E20 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sned1Q70E20 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sned1Q70E20 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sned1Q70E20 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sned1Q70E20 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sned1Q70E20 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sned1Q70E20 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.71■□□□□ 0.75
Sned1Q70E20 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sned1Q70E20 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sned1Q70E20 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.7■□□□□ 0.74
Sned1Q70E20 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Sned1Q70E20 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sned1Q70E20 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sned1Q70E20 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sned1Q70E20 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sned1Q70E20 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC19.7■□□□□ 0.74
Sned1Q70E20 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sned1Q70E20 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sned1Q70E20 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sned1Q70E20 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sned1Q70E20 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Sned1Q70E20 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sned1Q70E20 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sned1Q70E20 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sned1Q70E20 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sned1Q70E20 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sned1Q70E20 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sned1Q70E20 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms