Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Npc1l1Q6T3U4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Npc1l1Q6T3U4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Npc1l1Q6T3U4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.62■□□□□ 0.73
Npc1l1Q6T3U4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Npc1l1Q6T3U4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Npc1l1Q6T3U4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Npc1l1Q6T3U4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Npc1l1Q6T3U4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Npc1l1Q6T3U4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Npc1l1Q6T3U4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Npc1l1Q6T3U4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Npc1l1Q6T3U4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Npc1l1Q6T3U4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.62■□□□□ 0.73
Npc1l1Q6T3U4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Npc1l1Q6T3U4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Npc1l1Q6T3U4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Gm18733-201ENSMUST00000173950 856 ntBASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Npc1l1Q6T3U4 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.6■□□□□ 0.73
Npc1l1Q6T3U4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1l1Q6T3U4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1l1Q6T3U4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1l1Q6T3U4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1l1Q6T3U4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1l1Q6T3U4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1l1Q6T3U4 Gm12644-201ENSMUST00000119935 606 ntBASIC19.6■□□□□ 0.73
Npc1l1Q6T3U4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1l1Q6T3U4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1l1Q6T3U4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1l1Q6T3U4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1l1Q6T3U4 Haglr-201ENSMUST00000100000 2085 ntBASIC19.6■□□□□ 0.73
Npc1l1Q6T3U4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1l1Q6T3U4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1l1Q6T3U4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1l1Q6T3U4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1l1Q6T3U4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1l1Q6T3U4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1l1Q6T3U4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1l1Q6T3U4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.58■□□□□ 0.73
Npc1l1Q6T3U4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Npc1l1Q6T3U4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Npc1l1Q6T3U4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Npc1l1Q6T3U4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Npc1l1Q6T3U4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Npc1l1Q6T3U4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Npc1l1Q6T3U4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Npc1l1Q6T3U4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Npc1l1Q6T3U4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Npc1l1Q6T3U4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Npc1l1Q6T3U4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.58■□□□□ 0.72
Npc1l1Q6T3U4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms