Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm44872-201ENSMUST00000207864 420 ntBASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn10aQ6QIY3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn10aQ6QIY3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn10aQ6QIY3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn10aQ6QIY3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn10aQ6QIY3 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.5■□□□□ 0.55
Scn10aQ6QIY3 Gm44492-201ENSMUST00000197012 141 ntBASIC18.5■□□□□ 0.55
Scn10aQ6QIY3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn10aQ6QIY3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn10aQ6QIY3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn10aQ6QIY3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn10aQ6QIY3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn10aQ6QIY3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn10aQ6QIY3 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.5■□□□□ 0.55
Scn10aQ6QIY3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.5■□□□□ 0.55
Scn10aQ6QIY3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.5■□□□□ 0.55
Scn10aQ6QIY3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.5■□□□□ 0.55
Scn10aQ6QIY3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.5■□□□□ 0.55
Scn10aQ6QIY3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn10aQ6QIY3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Scn10aQ6QIY3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn10aQ6QIY3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scn10aQ6QIY3 Iqck-206ENSMUST00000208658 2891 ntBASIC18.49■□□□□ 0.55
Scn10aQ6QIY3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn10aQ6QIY3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn10aQ6QIY3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn10aQ6QIY3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn10aQ6QIY3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn10aQ6QIY3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Scn10aQ6QIY3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.49■□□□□ 0.55
Scn10aQ6QIY3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.49■□□□□ 0.55
Scn10aQ6QIY3 Gm5177-201ENSMUST00000183092 997 ntBASIC18.49■□□□□ 0.55
Scn10aQ6QIY3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn10aQ6QIY3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn10aQ6QIY3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn10aQ6QIY3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scn10aQ6QIY3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn10aQ6QIY3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Gm27321-201ENSMUST00000185021 205 ntBASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Gm15427-201ENSMUST00000117288 531 ntBASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn10aQ6QIY3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Gm5312-201ENSMUST00000203728 547 ntBASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn10aQ6QIY3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn10aQ6QIY3 Gm45747-201ENSMUST00000212203 999 ntBASIC18.46■□□□□ 0.55
Scn10aQ6QIY3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms