Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.26■□□□□ 0.67
Nup98Q6PFD9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.25■□□□□ 0.67
Nup98Q6PFD9 Gm11764-201ENSMUST00000120221 623 ntBASIC19.25■□□□□ 0.67
Nup98Q6PFD9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup98Q6PFD9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nup98Q6PFD9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.25■□□□□ 0.67
Nup98Q6PFD9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.25■□□□□ 0.67
Nup98Q6PFD9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup98Q6PFD9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Nup98Q6PFD9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup98Q6PFD9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup98Q6PFD9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nup98Q6PFD9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup98Q6PFD9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Nup98Q6PFD9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup98Q6PFD9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nup98Q6PFD9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup98Q6PFD9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nup98Q6PFD9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.25■□□□□ 0.67
Nup98Q6PFD9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup98Q6PFD9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup98Q6PFD9 Gm12260-201ENSMUST00000122447 411 ntBASIC19.24■□□□□ 0.67
Nup98Q6PFD9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Nup98Q6PFD9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nup98Q6PFD9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.24■□□□□ 0.67
Nup98Q6PFD9 Gm5264-201ENSMUST00000190584 848 ntBASIC19.24■□□□□ 0.67
Nup98Q6PFD9 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.24■□□□□ 0.67
Nup98Q6PFD9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup98Q6PFD9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup98Q6PFD9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup98Q6PFD9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.24■□□□□ 0.67
Nup98Q6PFD9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup98Q6PFD9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.24■□□□□ 0.67
Nup98Q6PFD9 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.24■□□□□ 0.67
Nup98Q6PFD9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup98Q6PFD9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup98Q6PFD9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.23■□□□□ 0.67
Nup98Q6PFD9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 AC154222.1-201ENSMUST00000223882 475 ntBASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Gm10175-201ENSMUST00000086013 645 ntBASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup98Q6PFD9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup98Q6PFD9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup98Q6PFD9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup98Q6PFD9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Nup98Q6PFD9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.22■□□□□ 0.67
Nup98Q6PFD9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.22■□□□□ 0.67
Nup98Q6PFD9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.22■□□□□ 0.67
Nup98Q6PFD9 Gm6257-201ENSMUST00000163864 910 ntBASIC19.22■□□□□ 0.67
Nup98Q6PFD9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup98Q6PFD9 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.22■□□□□ 0.67
Nup98Q6PFD9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nup98Q6PFD9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup98Q6PFD9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nup98Q6PFD9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nup98Q6PFD9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.21■□□□□ 0.67
Nup98Q6PFD9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nup98Q6PFD9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nup98Q6PFD9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nup98Q6PFD9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nup98Q6PFD9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nup98Q6PFD9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nup98Q6PFD9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nup98Q6PFD9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Nup98Q6PFD9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms