Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Casc4Q6P2L7 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Casc4Q6P2L7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Casc4Q6P2L7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Casc4Q6P2L7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Casc4Q6P2L7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Casc4Q6P2L7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Casc4Q6P2L7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Casc4Q6P2L7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Casc4Q6P2L7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Casc4Q6P2L7 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Casc4Q6P2L7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Casc4Q6P2L7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.62■□□□□ 0.25
Casc4Q6P2L7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Casc4Q6P2L7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 AA414768-201ENSMUST00000121924 1257 ntBASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.61■□□□□ 0.25
Casc4Q6P2L7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Casc4Q6P2L7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Casc4Q6P2L7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.59■□□□□ 0.25
Casc4Q6P2L7 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.59■□□□□ 0.25
Casc4Q6P2L7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Casc4Q6P2L7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Casc4Q6P2L7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Casc4Q6P2L7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Casc4Q6P2L7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms