Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac4Q6NZM9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac4Q6NZM9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Gm11355-201ENSMUST00000121120 306 ntBASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac4Q6NZM9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac4Q6NZM9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac4Q6NZM9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac4Q6NZM9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac4Q6NZM9 Gm10013-201ENSMUST00000106074 672 ntBASIC18.36■□□□□ 0.53
Hdac4Q6NZM9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac4Q6NZM9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac4Q6NZM9 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.36■□□□□ 0.53
Hdac4Q6NZM9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.36■□□□□ 0.53
Hdac4Q6NZM9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac4Q6NZM9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac4Q6NZM9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac4Q6NZM9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac4Q6NZM9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac4Q6NZM9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac4Q6NZM9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Hdac4Q6NZM9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac4Q6NZM9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac4Q6NZM9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms