Protein–RNA interactions for Protein: Q6NS45

Ccdc66, Coiled-coil domain-containing protein 66, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc66Q6NS45 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc66Q6NS45 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc66Q6NS45 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19■□□□□ 0.63
Ccdc66Q6NS45 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc66Q6NS45 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc66Q6NS45 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc66Q6NS45 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc66Q6NS45 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc66Q6NS45 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc66Q6NS45 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc66Q6NS45 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc66Q6NS45 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19■□□□□ 0.63
Ccdc66Q6NS45 AC135963.1-201ENSMUST00000211640 717 ntBASIC19■□□□□ 0.63
Ccdc66Q6NS45 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc66Q6NS45 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ccdc66Q6NS45 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc66Q6NS45 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc66Q6NS45 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc66Q6NS45 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc66Q6NS45 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc66Q6NS45 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc66Q6NS45 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc66Q6NS45 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc66Q6NS45 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc66Q6NS45 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc66Q6NS45 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.99■□□□□ 0.63
Ccdc66Q6NS45 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc66Q6NS45 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.99■□□□□ 0.63
Ccdc66Q6NS45 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc66Q6NS45 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.99■□□□□ 0.63
Ccdc66Q6NS45 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.99■□□□□ 0.63
Ccdc66Q6NS45 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc66Q6NS45 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc66Q6NS45 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc66Q6NS45 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.99■□□□□ 0.63
Ccdc66Q6NS45 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc66Q6NS45 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc66Q6NS45 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc66Q6NS45 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Gm22240-201ENSMUST00000175225 82 ntBASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Gm7370-201ENSMUST00000219471 767 ntBASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Gm10812-201ENSMUST00000099864 546 ntBASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc66Q6NS45 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Gm27011-201ENSMUST00000182352 972 ntBASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc66Q6NS45 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc66Q6NS45 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc66Q6NS45 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc66Q6NS45 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc66Q6NS45 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc66Q6NS45 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc66Q6NS45 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc66Q6NS45 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Ccdc66Q6NS45 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.96■□□□□ 0.63
Ccdc66Q6NS45 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.96■□□□□ 0.63
Ccdc66Q6NS45 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.96■□□□□ 0.63
Ccdc66Q6NS45 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc66Q6NS45 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc66Q6NS45 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms