Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.07■□□□□ 0.8
Pdzrn3Q69ZS0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdzrn3Q69ZS0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdzrn3Q69ZS0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pdzrn3Q69ZS0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.07■□□□□ 0.8
Pdzrn3Q69ZS0 Gm18421-201ENSMUST00000204122 625 ntBASIC20.07■□□□□ 0.8
Pdzrn3Q69ZS0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pdzrn3Q69ZS0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
Pdzrn3Q69ZS0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pdzrn3Q69ZS0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdzrn3Q69ZS0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdzrn3Q69ZS0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Pdzrn3Q69ZS0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdzrn3Q69ZS0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdzrn3Q69ZS0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.07■□□□□ 0.8
Pdzrn3Q69ZS0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pdzrn3Q69ZS0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pdzrn3Q69ZS0 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdzrn3Q69ZS0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.05■□□□□ 0.8
Pdzrn3Q69ZS0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdzrn3Q69ZS0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdzrn3Q69ZS0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdzrn3Q69ZS0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Pdzrn3Q69ZS0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Pdzrn3Q69ZS0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pdzrn3Q69ZS0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdzrn3Q69ZS0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdzrn3Q69ZS0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.05■□□□□ 0.8
Pdzrn3Q69ZS0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.05■□□□□ 0.8
Pdzrn3Q69ZS0 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.05■□□□□ 0.8
Pdzrn3Q69ZS0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdzrn3Q69ZS0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdzrn3Q69ZS0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.05■□□□□ 0.8
Pdzrn3Q69ZS0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdzrn3Q69ZS0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Pdzrn3Q69ZS0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdzrn3Q69ZS0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdzrn3Q69ZS0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Gm18206-201ENSMUST00000207027 926 ntBASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pdzrn3Q69ZS0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 Gm2651-201ENSMUST00000203560 838 ntBASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 Gm20628-201ENSMUST00000177363 3215 ntBASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdzrn3Q69ZS0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms