Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six2Q62232 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Six2Q62232 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.51■□□□□ 0.39
Six2Q62232 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Six2Q62232 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Six2Q62232 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.51■□□□□ 0.39
Six2Q62232 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Six2Q62232 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.51■□□□□ 0.39
Six2Q62232 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six2Q62232 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six2Q62232 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six2Q62232 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six2Q62232 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Six2Q62232 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six2Q62232 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six2Q62232 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Six2Q62232 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six2Q62232 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Six2Q62232 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Six2Q62232 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Six2Q62232 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Six2Q62232 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six2Q62232 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six2Q62232 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six2Q62232 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six2Q62232 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.5■□□□□ 0.39
Six2Q62232 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Six2Q62232 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Six2Q62232 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Six2Q62232 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Six2Q62232 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six2Q62232 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six2Q62232 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six2Q62232 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six2Q62232 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Six2Q62232 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Six2Q62232 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Six2Q62232 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Six2Q62232 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six2Q62232 Gm18101-201ENSMUST00000215769 548 ntBASIC17.5■□□□□ 0.39
Six2Q62232 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Six2Q62232 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six2Q62232 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six2Q62232 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.5■□□□□ 0.39
Six2Q62232 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six2Q62232 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Six2Q62232 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six2Q62232 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six2Q62232 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six2Q62232 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Six2Q62232 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 Gm10231-201ENSMUST00000181584 441 ntBASIC17.49■□□□□ 0.39
Six2Q62232 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Six2Q62232 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.49■□□□□ 0.39
Six2Q62232 Gm10175-202ENSMUST00000208752 441 ntBASIC17.49■□□□□ 0.39
Six2Q62232 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Six2Q62232 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Six2Q62232 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Six2Q62232 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six2Q62232 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Six2Q62232 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six2Q62232 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Six2Q62232 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.48■□□□□ 0.39
Six2Q62232 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Six2Q62232 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.48■□□□□ 0.39
Six2Q62232 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six2Q62232 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six2Q62232 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Six2Q62232 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.48■□□□□ 0.39
Six2Q62232 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six2Q62232 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Six2Q62232 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Six2Q62232 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six2Q62232 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six2Q62232 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Six2Q62232 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six2Q62232 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Six2Q62232 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Six2Q62232 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Six2Q62232 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.47■□□□□ 0.39
Six2Q62232 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six2Q62232 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms