Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Six1Q62231 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six1Q62231 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.85■□□□□ 0.29
Six1Q62231 Gm22240-201ENSMUST00000175225 82 ntBASIC16.85■□□□□ 0.29
Six1Q62231 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Six1Q62231 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.85■□□□□ 0.29
Six1Q62231 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six1Q62231 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six1Q62231 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six1Q62231 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Six1Q62231 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six1Q62231 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Six1Q62231 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Six1Q62231 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six1Q62231 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Six1Q62231 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Six1Q62231 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Six1Q62231 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six1Q62231 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Six1Q62231 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Six1Q62231 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.84■□□□□ 0.29
Six1Q62231 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Six1Q62231 Gm27011-201ENSMUST00000182352 972 ntBASIC16.84■□□□□ 0.29
Six1Q62231 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.84■□□□□ 0.29
Six1Q62231 Gm5417-201ENSMUST00000079706 384 ntBASIC16.84■□□□□ 0.29
Six1Q62231 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Six1Q62231 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Six1Q62231 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Six1Q62231 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six1Q62231 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.83■□□□□ 0.28
Six1Q62231 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Six1Q62231 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six1Q62231 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.83■□□□□ 0.28
Six1Q62231 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Six1Q62231 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.83■□□□□ 0.28
Six1Q62231 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six1Q62231 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six1Q62231 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six1Q62231 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six1Q62231 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six1Q62231 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six1Q62231 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six1Q62231 Prob1-201ENSMUST00000097619 3021 ntBASIC16.83■□□□□ 0.28
Six1Q62231 Gm10812-201ENSMUST00000099864 546 ntBASIC16.83■□□□□ 0.28
Six1Q62231 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.83■□□□□ 0.28
Six1Q62231 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.83■□□□□ 0.28
Six1Q62231 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six1Q62231 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six1Q62231 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six1Q62231 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six1Q62231 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six1Q62231 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six1Q62231 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six1Q62231 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six1Q62231 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.82■□□□□ 0.28
Six1Q62231 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.82■□□□□ 0.28
Six1Q62231 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Six1Q62231 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Six1Q62231 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six1Q62231 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six1Q62231 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six1Q62231 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six1Q62231 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.82■□□□□ 0.28
Six1Q62231 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Six1Q62231 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six1Q62231 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six1Q62231 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six1Q62231 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Six1Q62231 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six1Q62231 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Six1Q62231 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six1Q62231 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six1Q62231 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.81■□□□□ 0.28
Six1Q62231 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Six1Q62231 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six1Q62231 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Six1Q62231 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms