Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.31■□□□□ 0.68
Ctr9Q62018 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ctr9Q62018 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ctr9Q62018 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Ctr9Q62018 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctr9Q62018 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctr9Q62018 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctr9Q62018 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctr9Q62018 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ctr9Q62018 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.31■□□□□ 0.68
Ctr9Q62018 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Ctr9Q62018 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.31■□□□□ 0.68
Ctr9Q62018 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ctr9Q62018 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctr9Q62018 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctr9Q62018 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctr9Q62018 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Ctr9Q62018 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctr9Q62018 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ctr9Q62018 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ctr9Q62018 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.3■□□□□ 0.68
Ctr9Q62018 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ctr9Q62018 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ctr9Q62018 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctr9Q62018 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctr9Q62018 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.3■□□□□ 0.68
Ctr9Q62018 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ctr9Q62018 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctr9Q62018 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ctr9Q62018 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctr9Q62018 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctr9Q62018 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctr9Q62018 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctr9Q62018 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ctr9Q62018 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctr9Q62018 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctr9Q62018 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctr9Q62018 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctr9Q62018 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctr9Q62018 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctr9Q62018 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctr9Q62018 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctr9Q62018 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ctr9Q62018 Gm12895-201ENSMUST00000122214 226 ntBASIC19.29■□□□□ 0.68
Ctr9Q62018 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctr9Q62018 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctr9Q62018 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctr9Q62018 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctr9Q62018 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctr9Q62018 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.29■□□□□ 0.68
Ctr9Q62018 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Ctr9Q62018 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctr9Q62018 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctr9Q62018 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctr9Q62018 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctr9Q62018 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctr9Q62018 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ctr9Q62018 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctr9Q62018 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Ctr9Q62018 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctr9Q62018 Gm13312-201ENSMUST00000119631 718 ntBASIC19.28■□□□□ 0.68
Ctr9Q62018 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.28■□□□□ 0.68
Ctr9Q62018 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctr9Q62018 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ctr9Q62018 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.28■□□□□ 0.68
Ctr9Q62018 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.28■□□□□ 0.68
Ctr9Q62018 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.28■□□□□ 0.68
Ctr9Q62018 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ctr9Q62018 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctr9Q62018 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ctr9Q62018 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctr9Q62018 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.28■□□□□ 0.68
Ctr9Q62018 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctr9Q62018 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctr9Q62018 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ctr9Q62018 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctr9Q62018 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctr9Q62018 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ctr9Q62018 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Ctr9Q62018 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ctr9Q62018 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctr9Q62018 Gm34391-201ENSMUST00000203706 907 ntBASIC19.27■□□□□ 0.68
Ctr9Q62018 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctr9Q62018 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.27■□□□□ 0.68
Ctr9Q62018 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.27■□□□□ 0.68
Ctr9Q62018 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctr9Q62018 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ctr9Q62018 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ctr9Q62018 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ctr9Q62018 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ctr9Q62018 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ctr9Q62018 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctr9Q62018 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.26■□□□□ 0.67
Ctr9Q62018 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctr9Q62018 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctr9Q62018 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctr9Q62018 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ctr9Q62018 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctr9Q62018 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ctr9Q62018 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms