Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.91■□□□□ 0.62
Foxd1Q61345 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.91■□□□□ 0.62
Foxd1Q61345 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Foxd1Q61345 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Foxd1Q61345 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Foxd1Q61345 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Foxd1Q61345 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Foxd1Q61345 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Foxd1Q61345 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Foxd1Q61345 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Foxd1Q61345 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd1Q61345 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.9■□□□□ 0.62
Foxd1Q61345 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd1Q61345 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd1Q61345 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd1Q61345 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd1Q61345 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC18.9■□□□□ 0.62
Foxd1Q61345 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd1Q61345 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.9■□□□□ 0.62
Foxd1Q61345 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.9■□□□□ 0.62
Foxd1Q61345 AV026068-213ENSMUST00000223675 1171 ntBASIC18.9■□□□□ 0.62
Foxd1Q61345 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd1Q61345 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd1Q61345 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Foxd1Q61345 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd1Q61345 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd1Q61345 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd1Q61345 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd1Q61345 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Foxd1Q61345 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd1Q61345 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Foxd1Q61345 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd1Q61345 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd1Q61345 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.9■□□□□ 0.62
Foxd1Q61345 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd1Q61345 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd1Q61345 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Foxd1Q61345 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Foxd1Q61345 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Foxd1Q61345 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxd1Q61345 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Foxd1Q61345 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.89■□□□□ 0.61
Foxd1Q61345 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Foxd1Q61345 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.89■□□□□ 0.61
Foxd1Q61345 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.89■□□□□ 0.61
Foxd1Q61345 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Foxd1Q61345 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Foxd1Q61345 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxd1Q61345 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxd1Q61345 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Foxd1Q61345 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Foxd1Q61345 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Foxd1Q61345 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxd1Q61345 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Foxd1Q61345 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Foxd1Q61345 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Foxd1Q61345 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Foxd1Q61345 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Foxd1Q61345 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Foxd1Q61345 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Foxd1Q61345 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Foxd1Q61345 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.88■□□□□ 0.61
Foxd1Q61345 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.88■□□□□ 0.61
Foxd1Q61345 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18.88■□□□□ 0.61
Foxd1Q61345 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.88■□□□□ 0.61
Foxd1Q61345 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Foxd1Q61345 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Foxd1Q61345 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Foxd1Q61345 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Foxd1Q61345 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Foxd1Q61345 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Foxd1Q61345 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxd1Q61345 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Foxd1Q61345 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Foxd1Q61345 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxd1Q61345 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Foxd1Q61345 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Foxd1Q61345 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Foxd1Q61345 Gm38319-201ENSMUST00000194537 1266 ntBASIC18.87■□□□□ 0.61
Foxd1Q61345 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.87■□□□□ 0.61
Foxd1Q61345 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Foxd1Q61345 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxd1Q61345 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxd1Q61345 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxd1Q61345 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxd1Q61345 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxd1Q61345 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.86■□□□□ 0.61
Foxd1Q61345 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Foxd1Q61345 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Foxd1Q61345 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Foxd1Q61345 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.86■□□□□ 0.61
Foxd1Q61345 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
Foxd1Q61345 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Foxd1Q61345 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Foxd1Q61345 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Foxd1Q61345 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Foxd1Q61345 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Foxd1Q61345 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Foxd1Q61345 Gm13312-201ENSMUST00000119631 718 ntBASIC18.86■□□□□ 0.61
Foxd1Q61345 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms