Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ptch1Q61115 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ptch1Q61115 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
Ptch1Q61115 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ptch1Q61115 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ptch1Q61115 Best4-ps-201ENSMUST00000129783 1380 ntBASIC23.57■■□□□ 1.36
Ptch1Q61115 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ptch1Q61115 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ptch1Q61115 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ptch1Q61115 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Ptch1Q61115 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ptch1Q61115 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC23.57■■□□□ 1.36
Ptch1Q61115 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ptch1Q61115 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ptch1Q61115 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ptch1Q61115 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ptch1Q61115 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Ptch1Q61115 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC23.56■■□□□ 1.36
Ptch1Q61115 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptch1Q61115 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptch1Q61115 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptch1Q61115 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptch1Q61115 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptch1Q61115 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Ptch1Q61115 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptch1Q61115 Gm5177-201ENSMUST00000183092 997 ntBASIC23.56■■□□□ 1.36
Ptch1Q61115 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC23.56■■□□□ 1.36
Ptch1Q61115 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptch1Q61115 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptch1Q61115 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptch1Q61115 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptch1Q61115 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptch1Q61115 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Ptch1Q61115 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Ptch1Q61115 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ptch1Q61115 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ptch1Q61115 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ptch1Q61115 Gm4609-201ENSMUST00000106443 1002 ntBASIC23.55■■□□□ 1.36
Ptch1Q61115 Gm5138-201ENSMUST00000113842 1002 ntBASIC23.55■■□□□ 1.36
Ptch1Q61115 Gm15191-201ENSMUST00000117933 1000 ntBASIC23.55■■□□□ 1.36
Ptch1Q61115 Gm12182-201ENSMUST00000118655 1008 ntBASIC23.55■■□□□ 1.36
Ptch1Q61115 Gm13882-201ENSMUST00000120886 1002 ntBASIC23.55■■□□□ 1.36
Ptch1Q61115 Gm10284-201ENSMUST00000145057 1005 ntBASIC23.55■■□□□ 1.36
Ptch1Q61115 Gm10481-201ENSMUST00000179228 1002 ntBASIC23.55■■□□□ 1.36
Ptch1Q61115 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC23.55■■□□□ 1.36
Ptch1Q61115 Gm2574-201ENSMUST00000181051 1002 ntBASIC23.55■■□□□ 1.36
Ptch1Q61115 Gm3200-201ENSMUST00000181493 1002 ntBASIC23.55■■□□□ 1.36
Ptch1Q61115 Gm4518-201ENSMUST00000182638 718 ntBASIC23.55■■□□□ 1.36
Ptch1Q61115 Gm8330-201ENSMUST00000182754 1008 ntBASIC23.55■■□□□ 1.36
Ptch1Q61115 Gm4575-201ENSMUST00000182991 1002 ntBASIC23.55■■□□□ 1.36
Ptch1Q61115 Gm8709-201ENSMUST00000183230 1012 ntBASIC23.55■■□□□ 1.36
Ptch1Q61115 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Ptch1Q61115 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC23.55■■□□□ 1.36
Ptch1Q61115 Gm10293-201ENSMUST00000076317 1002 ntBASIC23.55■■□□□ 1.36
Ptch1Q61115 Gm6316-201ENSMUST00000082064 1020 ntBASIC23.55■■□□□ 1.36
Ptch1Q61115 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ptch1Q61115 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ptch1Q61115 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ptch1Q61115 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ptch1Q61115 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ptch1Q61115 Iqck-206ENSMUST00000208658 2891 ntBASIC23.55■■□□□ 1.36
Ptch1Q61115 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ptch1Q61115 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ptch1Q61115 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Ptch1Q61115 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC23.54■■□□□ 1.36
Ptch1Q61115 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ptch1Q61115 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC23.54■■□□□ 1.36
Ptch1Q61115 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ptch1Q61115 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ptch1Q61115 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ptch1Q61115 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ptch1Q61115 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ptch1Q61115 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ptch1Q61115 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ptch1Q61115 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ptch1Q61115 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ptch1Q61115 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ptch1Q61115 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
Ptch1Q61115 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ptch1Q61115 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ptch1Q61115 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Ptch1Q61115 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ptch1Q61115 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ptch1Q61115 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC23.52■■□□□ 1.36
Ptch1Q61115 Gm9682-201ENSMUST00000197505 556 ntBASIC23.52■■□□□ 1.36
Ptch1Q61115 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ptch1Q61115 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ptch1Q61115 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC23.52■■□□□ 1.36
Ptch1Q61115 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ptch1Q61115 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ptch1Q61115 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ptch1Q61115 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.35
Ptch1Q61115 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
Ptch1Q61115 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ptch1Q61115 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
Ptch1Q61115 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
Ptch1Q61115 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC23.51■■□□□ 1.35
Ptch1Q61115 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ptch1Q61115 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ptch1Q61115 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms