Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nr1h4Q60641 Gm37856-201ENSMUST00000191634 999 ntBASIC15.66■□□□□ 0.1
Nr1h4Q60641 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Nr1h4Q60641 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1h4Q60641 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.66■□□□□ 0.1
Nr1h4Q60641 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1h4Q60641 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1h4Q60641 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Nr1h4Q60641 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Nr1h4Q60641 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1h4Q60641 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1h4Q60641 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nr1h4Q60641 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1h4Q60641 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.66■□□□□ 0.1
Nr1h4Q60641 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1h4Q60641 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nr1h4Q60641 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1h4Q60641 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1h4Q60641 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Gm5643-201ENSMUST00000117081 966 ntBASIC15.65■□□□□ 0.1
Nr1h4Q60641 Gm7638-201ENSMUST00000121348 967 ntBASIC15.65■□□□□ 0.1
Nr1h4Q60641 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.65■□□□□ 0.1
Nr1h4Q60641 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.65■□□□□ 0.1
Nr1h4Q60641 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nr1h4Q60641 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Nr1h4Q60641 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Nr1h4Q60641 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Gm18958-201ENSMUST00000174258 762 ntBASIC15.64■□□□□ 0.09
Nr1h4Q60641 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.64■□□□□ 0.09
Nr1h4Q60641 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.64■□□□□ 0.09
Nr1h4Q60641 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nr1h4Q60641 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Nr1h4Q60641 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Gm38027-201ENSMUST00000192315 235 ntBASIC15.63■□□□□ 0.09
Nr1h4Q60641 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nr1h4Q60641 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nr1h4Q60641 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms