Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 Gm15173-201ENSMUST00000122049 433 ntBASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 Gm9727-201ENSMUST00000161387 555 ntBASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC21.35■■□□□ 1.01
Scaf1Q5U4C3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gm4609-201ENSMUST00000106443 1002 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gm5138-201ENSMUST00000113842 1002 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gm15191-201ENSMUST00000117933 1000 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gm12182-201ENSMUST00000118655 1008 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gm13882-201ENSMUST00000120886 1002 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gm10284-201ENSMUST00000145057 1005 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gm10481-201ENSMUST00000179228 1002 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gm2574-201ENSMUST00000181051 1002 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gm3200-201ENSMUST00000181493 1002 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gm8825-201ENSMUST00000182565 998 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gm4518-201ENSMUST00000182638 718 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gm8330-201ENSMUST00000182754 1008 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gm4575-201ENSMUST00000182991 1002 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gm8709-201ENSMUST00000183230 1012 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gm5264-201ENSMUST00000190584 848 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gm10293-201ENSMUST00000076317 1002 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gm15590-201ENSMUST00000078419 552 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gm6316-201ENSMUST00000082064 1020 ntBASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Scaf1Q5U4C3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Scaf1Q5U4C3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Scaf1Q5U4C3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC21.33■■□□□ 1.01
Scaf1Q5U4C3 Gm27628-201ENSMUST00000184911 107 ntBASIC21.33■■□□□ 1.01
Scaf1Q5U4C3 Gm43332-201ENSMUST00000202511 1044 ntBASIC21.33■■□□□ 1.01
Scaf1Q5U4C3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC21.33■■□□□ 1.01
Scaf1Q5U4C3 AC159106.1-201ENSMUST00000224421 690 ntBASIC21.33■■□□□ 1.01
Scaf1Q5U4C3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scaf1Q5U4C3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC21.33■■□□□ 1.01
Scaf1Q5U4C3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Scaf1Q5U4C3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scaf1Q5U4C3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC21.33■■□□□ 1.01
Scaf1Q5U4C3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Scaf1Q5U4C3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Scaf1Q5U4C3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Scaf1Q5U4C3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC21.33■■□□□ 1
Scaf1Q5U4C3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC21.33■■□□□ 1
Scaf1Q5U4C3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC21.33■■□□□ 1
Scaf1Q5U4C3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Scaf1Q5U4C3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scaf1Q5U4C3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scaf1Q5U4C3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scaf1Q5U4C3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scaf1Q5U4C3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scaf1Q5U4C3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Scaf1Q5U4C3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scaf1Q5U4C3 Gm2308-201ENSMUST00000166539 1004 ntBASIC21.32■■□□□ 1
Scaf1Q5U4C3 Gm2756-201ENSMUST00000195851 400 ntBASIC21.32■■□□□ 1
Scaf1Q5U4C3 AC159093.1-201ENSMUST00000227779 380 ntBASIC21.32■■□□□ 1
Scaf1Q5U4C3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Scaf1Q5U4C3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Scaf1Q5U4C3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scaf1Q5U4C3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Scaf1Q5U4C3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scaf1Q5U4C3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Scaf1Q5U4C3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scaf1Q5U4C3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scaf1Q5U4C3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scaf1Q5U4C3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC21.31■■□□□ 1
Scaf1Q5U4C3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scaf1Q5U4C3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC21.31■■□□□ 1
Scaf1Q5U4C3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC21.31■■□□□ 1
Scaf1Q5U4C3 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms