Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trpm3Q5F4S9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trpm3Q5F4S9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trpm3Q5F4S9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trpm3Q5F4S9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trpm3Q5F4S9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trpm3Q5F4S9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trpm3Q5F4S9 Gm14140-201ENSMUST00000119999 995 ntBASIC20.69■□□□□ 0.9
Trpm3Q5F4S9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trpm3Q5F4S9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trpm3Q5F4S9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.69■□□□□ 0.9
Trpm3Q5F4S9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trpm3Q5F4S9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trpm3Q5F4S9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trpm3Q5F4S9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trpm3Q5F4S9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm3Q5F4S9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm3Q5F4S9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm3Q5F4S9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm3Q5F4S9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm3Q5F4S9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm3Q5F4S9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm3Q5F4S9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.68■□□□□ 0.9
Trpm3Q5F4S9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm3Q5F4S9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.68■□□□□ 0.9
Trpm3Q5F4S9 Gm5682-201ENSMUST00000173402 505 ntBASIC20.68■□□□□ 0.9
Trpm3Q5F4S9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.68■□□□□ 0.9
Trpm3Q5F4S9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.68■□□□□ 0.9
Trpm3Q5F4S9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm3Q5F4S9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trpm3Q5F4S9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm3Q5F4S9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm3Q5F4S9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpm3Q5F4S9 Gm15467-201ENSMUST00000120582 445 ntBASIC20.67■□□□□ 0.9
Trpm3Q5F4S9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trpm3Q5F4S9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.67■□□□□ 0.9
Trpm3Q5F4S9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.67■□□□□ 0.9
Trpm3Q5F4S9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpm3Q5F4S9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpm3Q5F4S9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.67■□□□□ 0.9
Trpm3Q5F4S9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpm3Q5F4S9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpm3Q5F4S9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpm3Q5F4S9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trpm3Q5F4S9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trpm3Q5F4S9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpm3Q5F4S9 Gm6257-201ENSMUST00000163864 910 ntBASIC20.67■□□□□ 0.9
Trpm3Q5F4S9 Gm43575-201ENSMUST00000196420 516 ntBASIC20.67■□□□□ 0.9
Trpm3Q5F4S9 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.67■□□□□ 0.9
Trpm3Q5F4S9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC20.67■□□□□ 0.9
Trpm3Q5F4S9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trpm3Q5F4S9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trpm3Q5F4S9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trpm3Q5F4S9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trpm3Q5F4S9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trpm3Q5F4S9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trpm3Q5F4S9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trpm3Q5F4S9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trpm3Q5F4S9 Gm23935-201ENSMUST00000102303 57 ntBASIC20.66■□□□□ 0.9
Trpm3Q5F4S9 Gm24270-201ENSMUST00000102326 57 ntBASIC20.66■□□□□ 0.9
Trpm3Q5F4S9 Gm24245-201ENSMUST00000157318 57 ntBASIC20.66■□□□□ 0.9
Trpm3Q5F4S9 AV026068-213ENSMUST00000223675 1171 ntBASIC20.66■□□□□ 0.9
Trpm3Q5F4S9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trpm3Q5F4S9 Gm10175-201ENSMUST00000086013 645 ntBASIC20.66■□□□□ 0.9
Trpm3Q5F4S9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trpm3Q5F4S9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trpm3Q5F4S9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpm3Q5F4S9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Trpm3Q5F4S9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.64■□□□□ 0.9
Trpm3Q5F4S9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC20.64■□□□□ 0.9
Trpm3Q5F4S9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trpm3Q5F4S9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Trpm3Q5F4S9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trpm3Q5F4S9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trpm3Q5F4S9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trpm3Q5F4S9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.64■□□□□ 0.89
Trpm3Q5F4S9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Trpm3Q5F4S9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trpm3Q5F4S9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trpm3Q5F4S9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.64■□□□□ 0.89
Trpm3Q5F4S9 Gm14494-201ENSMUST00000118786 435 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms