Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Gm21559-201ENSMUST00000220638 855 ntBASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Gm8587-201ENSMUST00000076538 843 ntBASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf20Q5DTM8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf20Q5DTM8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf20Q5DTM8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf20Q5DTM8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf20Q5DTM8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rnf20Q5DTM8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Rnf20Q5DTM8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.54■□□□□ 0.72
Rnf20Q5DTM8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rnf20Q5DTM8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf20Q5DTM8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf20Q5DTM8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf20Q5DTM8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf20Q5DTM8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf20Q5DTM8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf20Q5DTM8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf20Q5DTM8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf20Q5DTM8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf20Q5DTM8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf20Q5DTM8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.53■□□□□ 0.72
Rnf20Q5DTM8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf20Q5DTM8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf20Q5DTM8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf20Q5DTM8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf20Q5DTM8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf20Q5DTM8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf20Q5DTM8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Rnf20Q5DTM8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rnf20Q5DTM8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf20Q5DTM8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf20Q5DTM8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Rnf20Q5DTM8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rnf20Q5DTM8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf20Q5DTM8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf20Q5DTM8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf20Q5DTM8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf20Q5DTM8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf20Q5DTM8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf20Q5DTM8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Rnf20Q5DTM8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.52■□□□□ 0.72
Rnf20Q5DTM8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf20Q5DTM8 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.52■□□□□ 0.72
Rnf20Q5DTM8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf20Q5DTM8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf20Q5DTM8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf20Q5DTM8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
Rnf20Q5DTM8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.52■□□□□ 0.71
Rnf20Q5DTM8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.52■□□□□ 0.71
Rnf20Q5DTM8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf20Q5DTM8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms