Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Ddx49Q4FZF3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.05■□□□□ 0.64
Ddx49Q4FZF3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx49Q4FZF3 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.05■□□□□ 0.64
Ddx49Q4FZF3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ddx49Q4FZF3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx49Q4FZF3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx49Q4FZF3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Ddx49Q4FZF3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx49Q4FZF3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx49Q4FZF3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ddx49Q4FZF3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx49Q4FZF3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ddx49Q4FZF3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx49Q4FZF3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx49Q4FZF3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ddx49Q4FZF3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx49Q4FZF3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx49Q4FZF3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx49Q4FZF3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.04■□□□□ 0.64
Ddx49Q4FZF3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19.04■□□□□ 0.64
Ddx49Q4FZF3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.04■□□□□ 0.64
Ddx49Q4FZF3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx49Q4FZF3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.04■□□□□ 0.64
Ddx49Q4FZF3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.04■□□□□ 0.64
Ddx49Q4FZF3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx49Q4FZF3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ddx49Q4FZF3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx49Q4FZF3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.04■□□□□ 0.64
Ddx49Q4FZF3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx49Q4FZF3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.04■□□□□ 0.64
Ddx49Q4FZF3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx49Q4FZF3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx49Q4FZF3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx49Q4FZF3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx49Q4FZF3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx49Q4FZF3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.03■□□□□ 0.64
Ddx49Q4FZF3 AC154222.1-201ENSMUST00000223882 475 ntBASIC19.03■□□□□ 0.64
Ddx49Q4FZF3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx49Q4FZF3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx49Q4FZF3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx49Q4FZF3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx49Q4FZF3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx49Q4FZF3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx49Q4FZF3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ddx49Q4FZF3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.03■□□□□ 0.64
Ddx49Q4FZF3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx49Q4FZF3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 Gm4995-201ENSMUST00000117247 432 ntBASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 Gm14494-201ENSMUST00000118786 435 ntBASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 Gm2756-201ENSMUST00000195851 400 ntBASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx49Q4FZF3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Ddx49Q4FZF3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Ddx49Q4FZF3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ddx49Q4FZF3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx49Q4FZF3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx49Q4FZF3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ddx49Q4FZF3 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.01■□□□□ 0.63
Ddx49Q4FZF3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx49Q4FZF3 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.01■□□□□ 0.63
Ddx49Q4FZF3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx49Q4FZF3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.01■□□□□ 0.63
Ddx49Q4FZF3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx49Q4FZF3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx49Q4FZF3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx49Q4FZF3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx49Q4FZF3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ddx49Q4FZF3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx49Q4FZF3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx49Q4FZF3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx49Q4FZF3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx49Q4FZF3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx49Q4FZF3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx49Q4FZF3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx49Q4FZF3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx49Q4FZF3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx49Q4FZF3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx49Q4FZF3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx49Q4FZF3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx49Q4FZF3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx49Q4FZF3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ddx49Q4FZF3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx49Q4FZF3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms