Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdkl5Q3UTQ8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Cdkl5Q3UTQ8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdkl5Q3UTQ8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdkl5Q3UTQ8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdkl5Q3UTQ8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.04■□□□□ 0.64
Cdkl5Q3UTQ8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Gm10231-201ENSMUST00000181584 441 ntBASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Gm10175-202ENSMUST00000208752 441 ntBASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl5Q3UTQ8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Cdkl5Q3UTQ8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkl5Q3UTQ8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.02■□□□□ 0.64
Cdkl5Q3UTQ8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkl5Q3UTQ8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkl5Q3UTQ8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.02■□□□□ 0.64
Cdkl5Q3UTQ8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkl5Q3UTQ8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkl5Q3UTQ8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkl5Q3UTQ8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkl5Q3UTQ8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.02■□□□□ 0.64
Cdkl5Q3UTQ8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Cdkl5Q3UTQ8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkl5Q3UTQ8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkl5Q3UTQ8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkl5Q3UTQ8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cdkl5Q3UTQ8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cdkl5Q3UTQ8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Cdkl5Q3UTQ8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cdkl5Q3UTQ8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Cdkl5Q3UTQ8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl5Q3UTQ8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Cdkl5Q3UTQ8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdkl5Q3UTQ8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdkl5Q3UTQ8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
Cdkl5Q3UTQ8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cdkl5Q3UTQ8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cdkl5Q3UTQ8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdkl5Q3UTQ8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cdkl5Q3UTQ8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19■□□□□ 0.63
Cdkl5Q3UTQ8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19■□□□□ 0.63
Cdkl5Q3UTQ8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19■□□□□ 0.63
Cdkl5Q3UTQ8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19■□□□□ 0.63
Cdkl5Q3UTQ8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cdkl5Q3UTQ8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19■□□□□ 0.63
Cdkl5Q3UTQ8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cdkl5Q3UTQ8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Cdkl5Q3UTQ8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdkl5Q3UTQ8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdkl5Q3UTQ8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdkl5Q3UTQ8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Cdkl5Q3UTQ8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms