Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Q3U1D9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Q3U1D9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.24□□□□□ -0.13
Q3U1D9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Mir8098-201ENSMUST00000184011 137 ntBASIC14.24□□□□□ -0.13
Q3U1D9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.24□□□□□ -0.13
Q3U1D9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.24□□□□□ -0.13
Q3U1D9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Q3U1D9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Q3U1D9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.24□□□□□ -0.13
Q3U1D9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Q3U1D9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.23□□□□□ -0.13
Q3U1D9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3U1D9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3U1D9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3U1D9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3U1D9 Gm12644-201ENSMUST00000119935 606 ntBASIC14.23□□□□□ -0.13
Q3U1D9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.23□□□□□ -0.13
Q3U1D9 Gm44454-201ENSMUST00000198541 138 ntBASIC14.23□□□□□ -0.13
Q3U1D9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Q3U1D9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3U1D9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Q3U1D9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3U1D9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3U1D9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Q3U1D9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Q3U1D9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Q3U1D9 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.22□□□□□ -0.13
Q3U1D9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3U1D9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Q3U1D9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3U1D9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3U1D9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3U1D9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3U1D9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3U1D9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.22□□□□□ -0.13
Q3U1D9 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.22□□□□□ -0.13
Q3U1D9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3U1D9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3U1D9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3U1D9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3U1D9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3U1D9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3U1D9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Q3U1D9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.22□□□□□ -0.13
Q3U1D9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3U1D9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3U1D9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3U1D9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.22□□□□□ -0.13
Q3U1D9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3U1D9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3U1D9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3U1D9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.21□□□□□ -0.13
Q3U1D9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Q3U1D9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3U1D9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3U1D9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3U1D9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.21□□□□□ -0.13
Q3U1D9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3U1D9 Gm15165-201ENSMUST00000118140 502 ntBASIC14.21□□□□□ -0.13
Q3U1D9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.21□□□□□ -0.13
Q3U1D9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3U1D9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3U1D9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Q3U1D9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Q3U1D9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.21□□□□□ -0.13
Q3U1D9 Mzt1-203ENSMUST00000227948 952 ntBASIC14.21□□□□□ -0.13
Q3U1D9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3U1D9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3U1D9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3U1D9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.21□□□□□ -0.14
Q3U1D9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Q3U1D9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Q3U1D9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Q3U1D9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Q3U1D9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Q3U1D9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Q3U1D9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3U1D9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Q3U1D9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Q3U1D9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3U1D9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms