Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Fndc4Q3TR08 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fndc4Q3TR08 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fndc4Q3TR08 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.03□□□□□ -0.16
Fndc4Q3TR08 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fndc4Q3TR08 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Fndc4Q3TR08 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.03□□□□□ -0.16
Fndc4Q3TR08 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fndc4Q3TR08 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fndc4Q3TR08 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fndc4Q3TR08 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fndc4Q3TR08 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fndc4Q3TR08 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Fndc4Q3TR08 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Fndc4Q3TR08 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fndc4Q3TR08 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.02□□□□□ -0.16
Fndc4Q3TR08 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fndc4Q3TR08 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fndc4Q3TR08 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fndc4Q3TR08 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fndc4Q3TR08 Gm24841-201ENSMUST00000158676 357 ntBASIC14.02□□□□□ -0.17
Fndc4Q3TR08 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Fndc4Q3TR08 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fndc4Q3TR08 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
Fndc4Q3TR08 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fndc4Q3TR08 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fndc4Q3TR08 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fndc4Q3TR08 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Fndc4Q3TR08 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fndc4Q3TR08 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Fndc4Q3TR08 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fndc4Q3TR08 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fndc4Q3TR08 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fndc4Q3TR08 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fndc4Q3TR08 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Fndc4Q3TR08 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fndc4Q3TR08 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fndc4Q3TR08 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fndc4Q3TR08 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Fndc4Q3TR08 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
Fndc4Q3TR08 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fndc4Q3TR08 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14□□□□□ -0.17
Fndc4Q3TR08 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14□□□□□ -0.17
Fndc4Q3TR08 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fndc4Q3TR08 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Fndc4Q3TR08 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fndc4Q3TR08 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Fndc4Q3TR08 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14□□□□□ -0.17
Fndc4Q3TR08 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14□□□□□ -0.17
Fndc4Q3TR08 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14□□□□□ -0.17
Fndc4Q3TR08 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14□□□□□ -0.17
Fndc4Q3TR08 Gm9694-201ENSMUST00000193347 1189 ntBASIC14□□□□□ -0.17
Fndc4Q3TR08 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14□□□□□ -0.17
Fndc4Q3TR08 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fndc4Q3TR08 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Fndc4Q3TR08 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14□□□□□ -0.17
Fndc4Q3TR08 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Fndc4Q3TR08 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Fndc4Q3TR08 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Fndc4Q3TR08 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fndc4Q3TR08 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14□□□□□ -0.17
Fndc4Q3TR08 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fndc4Q3TR08 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fndc4Q3TR08 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14□□□□□ -0.17
Fndc4Q3TR08 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14□□□□□ -0.17
Fndc4Q3TR08 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fndc4Q3TR08 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fndc4Q3TR08 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fndc4Q3TR08 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.99□□□□□ -0.17
Fndc4Q3TR08 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fndc4Q3TR08 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fndc4Q3TR08 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.99□□□□□ -0.17
Fndc4Q3TR08 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fndc4Q3TR08 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Fndc4Q3TR08 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Fndc4Q3TR08 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fndc4Q3TR08 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Fndc4Q3TR08 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms