Protein–RNA interactions for Protein: Q2VWQ2

Nell1, Protein kinase C-binding protein NELL1, mousemouse

Predictions only

Length 810 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nell1Q2VWQ2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nell1Q2VWQ2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nell1Q2VWQ2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nell1Q2VWQ2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nell1Q2VWQ2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nell1Q2VWQ2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Gm27000-201ENSMUST00000182943 842 ntBASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Nell1Q2VWQ2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nell1Q2VWQ2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nell1Q2VWQ2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nell1Q2VWQ2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nell1Q2VWQ2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nell1Q2VWQ2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nell1Q2VWQ2 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.02■□□□□ 0.16
Nell1Q2VWQ2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.02■□□□□ 0.16
Nell1Q2VWQ2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.02■□□□□ 0.16
Nell1Q2VWQ2 Gm8000-201ENSMUST00000188378 592 ntBASIC16.02■□□□□ 0.16
Nell1Q2VWQ2 Gm6376-201ENSMUST00000209407 580 ntBASIC16.02■□□□□ 0.16
Nell1Q2VWQ2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nell1Q2VWQ2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nell1Q2VWQ2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nell1Q2VWQ2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.02■□□□□ 0.16
Nell1Q2VWQ2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nell1Q2VWQ2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nell1Q2VWQ2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nell1Q2VWQ2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nell1Q2VWQ2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nell1Q2VWQ2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nell1Q2VWQ2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Gm13312-201ENSMUST00000119631 718 ntBASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nell1Q2VWQ2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms