Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Npas1P97459 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Npas1P97459 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Npas1P97459 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.82□□□□□ -0.2
Npas1P97459 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Npas1P97459 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Npas1P97459 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Npas1P97459 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Npas1P97459 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Npas1P97459 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Npas1P97459 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Npas1P97459 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Npas1P97459 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.81□□□□□ -0.2
Npas1P97459 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.81□□□□□ -0.2
Npas1P97459 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.81□□□□□ -0.2
Npas1P97459 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.81□□□□□ -0.2
Npas1P97459 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Npas1P97459 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Npas1P97459 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.81□□□□□ -0.2
Npas1P97459 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.81□□□□□ -0.2
Npas1P97459 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Npas1P97459 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Npas1P97459 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Npas1P97459 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Npas1P97459 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Npas1P97459 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Npas1P97459 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.8□□□□□ -0.2
Npas1P97459 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Npas1P97459 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Npas1P97459 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Npas1P97459 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Npas1P97459 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Npas1P97459 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Npas1P97459 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Npas1P97459 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.8□□□□□ -0.2
Npas1P97459 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Npas1P97459 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.8□□□□□ -0.2
Npas1P97459 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Npas1P97459 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.79□□□□□ -0.2
Npas1P97459 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npas1P97459 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npas1P97459 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npas1P97459 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Npas1P97459 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npas1P97459 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npas1P97459 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Npas1P97459 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Npas1P97459 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.79□□□□□ -0.2
Npas1P97459 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Npas1P97459 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.79□□□□□ -0.2
Npas1P97459 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Npas1P97459 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.79□□□□□ -0.2
Npas1P97459 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.79□□□□□ -0.2
Npas1P97459 Rab3c-203ENSMUST00000224180 967 ntBASIC13.79□□□□□ -0.2
Npas1P97459 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Npas1P97459 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npas1P97459 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npas1P97459 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npas1P97459 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Npas1P97459 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.79□□□□□ -0.2
Npas1P97459 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npas1P97459 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Npas1P97459 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.79□□□□□ -0.2
Npas1P97459 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npas1P97459 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Npas1P97459 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npas1P97459 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npas1P97459 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Npas1P97459 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npas1P97459 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.78□□□□□ -0.2
Npas1P97459 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npas1P97459 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npas1P97459 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npas1P97459 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Npas1P97459 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.78□□□□□ -0.2
Npas1P97459 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npas1P97459 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms