Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PrkdcP97313 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PrkdcP97313 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
PrkdcP97313 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
PrkdcP97313 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PrkdcP97313 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PrkdcP97313 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PrkdcP97313 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PrkdcP97313 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PrkdcP97313 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.2□□□□□ -0.62
PrkdcP97313 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PrkdcP97313 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PrkdcP97313 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PrkdcP97313 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PrkdcP97313 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PrkdcP97313 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PrkdcP97313 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.2□□□□□ -0.62
PrkdcP97313 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.2□□□□□ -0.62
PrkdcP97313 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC11.2□□□□□ -0.62
PrkdcP97313 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.2□□□□□ -0.62
PrkdcP97313 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PrkdcP97313 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PrkdcP97313 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PrkdcP97313 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PrkdcP97313 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PrkdcP97313 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
PrkdcP97313 Gm37153-201ENSMUST00000193637 231 ntBASIC11.2□□□□□ -0.62
PrkdcP97313 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
PrkdcP97313 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PrkdcP97313 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PrkdcP97313 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PrkdcP97313 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.2□□□□□ -0.62
PrkdcP97313 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.2□□□□□ -0.62
PrkdcP97313 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
PrkdcP97313 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.2□□□□□ -0.62
PrkdcP97313 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.2□□□□□ -0.62
PrkdcP97313 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
PrkdcP97313 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PrkdcP97313 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PrkdcP97313 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
PrkdcP97313 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PrkdcP97313 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
PrkdcP97313 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PrkdcP97313 Gm12151-201ENSMUST00000121374 290 ntBASIC11.19□□□□□ -0.62
PrkdcP97313 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.19□□□□□ -0.62
PrkdcP97313 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.19□□□□□ -0.62
PrkdcP97313 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.19□□□□□ -0.62
PrkdcP97313 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
PrkdcP97313 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
PrkdcP97313 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PrkdcP97313 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
PrkdcP97313 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
PrkdcP97313 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
PrkdcP97313 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
PrkdcP97313 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.19□□□□□ -0.62
PrkdcP97313 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PrkdcP97313 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.19□□□□□ -0.62
PrkdcP97313 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
PrkdcP97313 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PrkdcP97313 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
PrkdcP97313 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
PrkdcP97313 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
PrkdcP97313 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.19□□□□□ -0.62
PrkdcP97313 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.19□□□□□ -0.62
PrkdcP97313 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
PrkdcP97313 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.18□□□□□ -0.62
PrkdcP97313 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.18□□□□□ -0.62
PrkdcP97313 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.18□□□□□ -0.62
PrkdcP97313 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.18□□□□□ -0.62
PrkdcP97313 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
PrkdcP97313 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 Gm27618-201ENSMUST00000183671 60 ntBASIC11.18□□□□□ -0.62
PrkdcP97313 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.18□□□□□ -0.62
PrkdcP97313 Gm6007-201ENSMUST00000208170 823 ntBASIC11.18□□□□□ -0.62
PrkdcP97313 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
PrkdcP97313 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
PrkdcP97313 Gm25287-201ENSMUST00000103846 110 ntBASIC11.18□□□□□ -0.62
PrkdcP97313 Gm22918-201ENSMUST00000103855 110 ntBASIC11.18□□□□□ -0.62
PrkdcP97313 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.18□□□□□ -0.62
PrkdcP97313 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
PrkdcP97313 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
PrkdcP97313 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms