Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Trim43cP86449 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43cP86449 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43cP86449 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43cP86449 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43cP86449 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43cP86449 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43cP86449 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trim43cP86449 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43cP86449 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43cP86449 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trim43cP86449 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43cP86449 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim43cP86449 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim43cP86449 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43cP86449 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim43cP86449 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43cP86449 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.86■□□□□ 0.45
Trim43cP86449 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trim43cP86449 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim43cP86449 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43cP86449 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Trim43cP86449 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim43cP86449 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43cP86449 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43cP86449 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.86■□□□□ 0.45
Trim43cP86449 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43cP86449 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43cP86449 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43cP86449 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trim43cP86449 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43cP86449 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43cP86449 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.85■□□□□ 0.45
Trim43cP86449 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43cP86449 Gm23634-201ENSMUST00000175071 91 ntBASIC17.85■□□□□ 0.45
Trim43cP86449 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43cP86449 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim43cP86449 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43cP86449 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43cP86449 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43cP86449 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trim43cP86449 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43cP86449 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim43cP86449 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43cP86449 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43cP86449 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43cP86449 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43cP86449 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43cP86449 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim43cP86449 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43cP86449 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43cP86449 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim43cP86449 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43cP86449 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43cP86449 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43cP86449 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43cP86449 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43cP86449 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43cP86449 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim43cP86449 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Trim43cP86449 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43cP86449 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43cP86449 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43cP86449 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43cP86449 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim43cP86449 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43cP86449 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43cP86449 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim43cP86449 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Trim43cP86449 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim43cP86449 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim43cP86449 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim43cP86449 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.83■□□□□ 0.45
Trim43cP86449 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Trim43cP86449 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Trim43cP86449 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim43cP86449 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim43cP86449 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim43cP86449 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim43cP86449 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trim43cP86449 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim43cP86449 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim43cP86449 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
Trim43cP86449 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim43cP86449 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim43cP86449 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trim43cP86449 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim43cP86449 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43cP86449 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43cP86449 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43cP86449 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43cP86449 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43cP86449 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43cP86449 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43cP86449 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43cP86449 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43cP86449 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43cP86449 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43cP86449 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43cP86449 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms