Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.6■□□□□ 0.25
ThraP63058 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.6■□□□□ 0.25
ThraP63058 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.6■□□□□ 0.25
ThraP63058 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.6■□□□□ 0.25
ThraP63058 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.6■□□□□ 0.25
ThraP63058 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.6■□□□□ 0.25
ThraP63058 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ThraP63058 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ThraP63058 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ThraP63058 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ThraP63058 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ThraP63058 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ThraP63058 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.59■□□□□ 0.25
ThraP63058 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ThraP63058 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ThraP63058 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ThraP63058 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ThraP63058 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ThraP63058 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.59■□□□□ 0.25
ThraP63058 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ThraP63058 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ThraP63058 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ThraP63058 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ThraP63058 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ThraP63058 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ThraP63058 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ThraP63058 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.59■□□□□ 0.25
ThraP63058 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.59■□□□□ 0.25
ThraP63058 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.59■□□□□ 0.25
ThraP63058 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ThraP63058 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
ThraP63058 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ThraP63058 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
ThraP63058 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ThraP63058 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ThraP63058 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ThraP63058 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ThraP63058 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ThraP63058 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ThraP63058 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ThraP63058 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.58■□□□□ 0.24
ThraP63058 Gm27704-201ENSMUST00000185094 107 ntBASIC16.58■□□□□ 0.24
ThraP63058 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.58■□□□□ 0.24
ThraP63058 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.58■□□□□ 0.24
ThraP63058 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.58■□□□□ 0.24
ThraP63058 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ThraP63058 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ThraP63058 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ThraP63058 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ThraP63058 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ThraP63058 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ThraP63058 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ThraP63058 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ThraP63058 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ThraP63058 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ThraP63058 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ThraP63058 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ThraP63058 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ThraP63058 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ThraP63058 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ThraP63058 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ThraP63058 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ThraP63058 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ThraP63058 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ThraP63058 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ThraP63058 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ThraP63058 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ThraP63058 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ThraP63058 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ThraP63058 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ThraP63058 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ThraP63058 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
ThraP63058 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ThraP63058 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.57■□□□□ 0.24
ThraP63058 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ThraP63058 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms