Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.69□□□□□ -0.06
Abcd3P55096 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.69□□□□□ -0.06
Abcd3P55096 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abcd3P55096 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.69□□□□□ -0.06
Abcd3P55096 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abcd3P55096 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Abcd3P55096 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abcd3P55096 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abcd3P55096 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abcd3P55096 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Abcd3P55096 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.68□□□□□ -0.06
Abcd3P55096 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.68□□□□□ -0.06
Abcd3P55096 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Abcd3P55096 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Abcd3P55096 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.68□□□□□ -0.06
Abcd3P55096 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Abcd3P55096 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Abcd3P55096 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Abcd3P55096 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abcd3P55096 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abcd3P55096 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Abcd3P55096 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abcd3P55096 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Abcd3P55096 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abcd3P55096 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abcd3P55096 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abcd3P55096 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abcd3P55096 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Abcd3P55096 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.67□□□□□ -0.06
Abcd3P55096 Gm6433-201ENSMUST00000118634 875 ntBASIC14.67□□□□□ -0.06
Abcd3P55096 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Abcd3P55096 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Abcd3P55096 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Abcd3P55096 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abcd3P55096 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Abcd3P55096 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abcd3P55096 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abcd3P55096 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abcd3P55096 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abcd3P55096 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abcd3P55096 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Abcd3P55096 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abcd3P55096 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abcd3P55096 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Abcd3P55096 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Abcd3P55096 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Abcd3P55096 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
Abcd3P55096 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Abcd3P55096 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.66□□□□□ -0.06
Abcd3P55096 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Abcd3P55096 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms