Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.25■□□□□ 0.19
Pdx1P52946 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Pdx1P52946 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pdx1P52946 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pdx1P52946 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
Pdx1P52946 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.24■□□□□ 0.19
Pdx1P52946 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdx1P52946 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdx1P52946 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.24■□□□□ 0.19
Pdx1P52946 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdx1P52946 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Pdx1P52946 Gm6623-201ENSMUST00000173570 544 ntBASIC16.24■□□□□ 0.19
Pdx1P52946 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Pdx1P52946 Gm7977-201ENSMUST00000193787 748 ntBASIC16.24■□□□□ 0.19
Pdx1P52946 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pdx1P52946 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdx1P52946 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pdx1P52946 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdx1P52946 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pdx1P52946 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdx1P52946 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pdx1P52946 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdx1P52946 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdx1P52946 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pdx1P52946 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdx1P52946 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pdx1P52946 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdx1P52946 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pdx1P52946 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdx1P52946 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.24■□□□□ 0.19
Pdx1P52946 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pdx1P52946 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdx1P52946 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pdx1P52946 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pdx1P52946 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdx1P52946 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Pdx1P52946 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdx1P52946 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdx1P52946 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdx1P52946 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdx1P52946 Gm29518-201ENSMUST00000190858 372 ntBASIC16.23■□□□□ 0.19
Pdx1P52946 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdx1P52946 Gm17808-201ENSMUST00000200859 894 ntBASIC16.23■□□□□ 0.19
Pdx1P52946 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pdx1P52946 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pdx1P52946 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pdx1P52946 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdx1P52946 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdx1P52946 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdx1P52946 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Pdx1P52946 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdx1P52946 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pdx1P52946 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pdx1P52946 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdx1P52946 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pdx1P52946 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdx1P52946 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdx1P52946 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdx1P52946 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdx1P52946 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.22■□□□□ 0.19
Pdx1P52946 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pdx1P52946 Gm25016-201ENSMUST00000158399 131 ntBASIC16.22■□□□□ 0.19
Pdx1P52946 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pdx1P52946 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdx1P52946 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pdx1P52946 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pdx1P52946 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pdx1P52946 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdx1P52946 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdx1P52946 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pdx1P52946 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.22■□□□□ 0.19
Pdx1P52946 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdx1P52946 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdx1P52946 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdx1P52946 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.21■□□□□ 0.19
Pdx1P52946 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdx1P52946 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pdx1P52946 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdx1P52946 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdx1P52946 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pdx1P52946 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdx1P52946 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms