Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Brca1P48754 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Brca1P48754 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.35■□□□□ 0.53
Brca1P48754 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Brca1P48754 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Brca1P48754 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Brca1P48754 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.35■□□□□ 0.53
Brca1P48754 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.35■□□□□ 0.53
Brca1P48754 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC18.35■□□□□ 0.53
Brca1P48754 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.35■□□□□ 0.53
Brca1P48754 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Brca1P48754 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.35■□□□□ 0.53
Brca1P48754 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.35■□□□□ 0.53
Brca1P48754 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Brca1P48754 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Brca1P48754 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Brca1P48754 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Brca1P48754 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Brca1P48754 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Brca1P48754 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Brca1P48754 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.34■□□□□ 0.53
Brca1P48754 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Brca1P48754 Gm43438-201ENSMUST00000198133 379 ntBASIC18.34■□□□□ 0.53
Brca1P48754 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Brca1P48754 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Brca1P48754 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Brca1P48754 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Brca1P48754 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Brca1P48754 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Brca1P48754 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Brca1P48754 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Brca1P48754 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Brca1P48754 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Brca1P48754 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.33■□□□□ 0.53
Brca1P48754 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Brca1P48754 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Brca1P48754 Gm27494-201ENSMUST00000184735 189 ntBASIC18.33■□□□□ 0.53
Brca1P48754 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Brca1P48754 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Brca1P48754 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Brca1P48754 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Brca1P48754 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Brca1P48754 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Brca1P48754 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Brca1P48754 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Brca1P48754 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.33■□□□□ 0.52
Brca1P48754 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Brca1P48754 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Brca1P48754 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Brca1P48754 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.33■□□□□ 0.52
Brca1P48754 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.33■□□□□ 0.52
Brca1P48754 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Brca1P48754 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Brca1P48754 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brca1P48754 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brca1P48754 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brca1P48754 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Brca1P48754 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Brca1P48754 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Brca1P48754 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brca1P48754 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Brca1P48754 Rarb-207ENSMUST00000225921 2756 ntBASIC18.32■□□□□ 0.52
Brca1P48754 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brca1P48754 Gm5312-201ENSMUST00000203728 547 ntBASIC18.32■□□□□ 0.52
Brca1P48754 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC18.32■□□□□ 0.52
Brca1P48754 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brca1P48754 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Brca1P48754 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Brca1P48754 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Brca1P48754 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Brca1P48754 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Brca1P48754 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Brca1P48754 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Brca1P48754 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Brca1P48754 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Brca1P48754 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Brca1P48754 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Brca1P48754 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.31■□□□□ 0.52
Brca1P48754 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.31■□□□□ 0.52
Brca1P48754 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Brca1P48754 Gm13597-201ENSMUST00000121239 375 ntBASIC18.3■□□□□ 0.52
Brca1P48754 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC18.3■□□□□ 0.52
Brca1P48754 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Brca1P48754 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Brca1P48754 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Brca1P48754 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Brca1P48754 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Brca1P48754 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Brca1P48754 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Brca1P48754 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Brca1P48754 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Brca1P48754 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Brca1P48754 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.3■□□□□ 0.52
Brca1P48754 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Brca1P48754 AA543401-201ENSMUST00000164248 1269 ntBASIC18.3■□□□□ 0.52
Brca1P48754 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.3■□□□□ 0.52
Brca1P48754 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.3■□□□□ 0.52
Brca1P48754 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Brca1P48754 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Brca1P48754 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms