Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nedd4P46935 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Nedd4P46935 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nedd4P46935 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Nedd4P46935 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nedd4P46935 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nedd4P46935 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nedd4P46935 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Nedd4P46935 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nedd4P46935 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nedd4P46935 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nedd4P46935 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nedd4P46935 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nedd4P46935 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nedd4P46935 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nedd4P46935 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nedd4P46935 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nedd4P46935 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC19.69■□□□□ 0.74
Nedd4P46935 Gm5682-201ENSMUST00000173402 505 ntBASIC19.69■□□□□ 0.74
Nedd4P46935 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Nedd4P46935 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.69■□□□□ 0.74
Nedd4P46935 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nedd4P46935 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.69■□□□□ 0.74
Nedd4P46935 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Nedd4P46935 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Nedd4P46935 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nedd4P46935 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nedd4P46935 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nedd4P46935 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nedd4P46935 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.68■□□□□ 0.74
Nedd4P46935 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nedd4P46935 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nedd4P46935 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nedd4P46935 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Nedd4P46935 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC19.68■□□□□ 0.74
Nedd4P46935 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nedd4P46935 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nedd4P46935 Gm20949-201ENSMUST00000206478 952 ntBASIC19.68■□□□□ 0.74
Nedd4P46935 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nedd4P46935 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Nedd4P46935 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Nedd4P46935 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd4P46935 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd4P46935 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd4P46935 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd4P46935 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Nedd4P46935 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd4P46935 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd4P46935 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.67■□□□□ 0.74
Nedd4P46935 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Nedd4P46935 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.67■□□□□ 0.74
Nedd4P46935 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Nedd4P46935 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd4P46935 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd4P46935 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd4P46935 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd4P46935 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd4P46935 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd4P46935 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd4P46935 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.66■□□□□ 0.74
Nedd4P46935 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nedd4P46935 Gm25406-201ENSMUST00000157599 105 ntBASIC19.66■□□□□ 0.74
Nedd4P46935 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC19.66■□□□□ 0.74
Nedd4P46935 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Nedd4P46935 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.66■□□□□ 0.74
Nedd4P46935 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nedd4P46935 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Nedd4P46935 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nedd4P46935 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nedd4P46935 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Nedd4P46935 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nedd4P46935 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.66■□□□□ 0.74
Nedd4P46935 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nedd4P46935 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nedd4P46935 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nedd4P46935 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nedd4P46935 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nedd4P46935 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nedd4P46935 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nedd4P46935 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nedd4P46935 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nedd4P46935 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.65■□□□□ 0.74
Nedd4P46935 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nedd4P46935 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Nedd4P46935 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nedd4P46935 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
Nedd4P46935 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nedd4P46935 Gm27646-201ENSMUST00000183989 110 ntBASIC19.65■□□□□ 0.74
Nedd4P46935 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC19.65■□□□□ 0.74
Nedd4P46935 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nedd4P46935 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nedd4P46935 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nedd4P46935 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nedd4P46935 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nedd4P46935 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Nedd4P46935 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nedd4P46935 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Nedd4P46935 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.64■□□□□ 0.74
Nedd4P46935 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nedd4P46935 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms