Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HmgclP38060 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HmgclP38060 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HmgclP38060 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HmgclP38060 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HmgclP38060 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HmgclP38060 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HmgclP38060 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HmgclP38060 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.18■□□□□ 0.18
HmgclP38060 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HmgclP38060 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
HmgclP38060 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HmgclP38060 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HmgclP38060 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HmgclP38060 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HmgclP38060 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
HmgclP38060 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.18■□□□□ 0.18
HmgclP38060 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.18■□□□□ 0.18
HmgclP38060 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HmgclP38060 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.17■□□□□ 0.18
HmgclP38060 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HmgclP38060 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HmgclP38060 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HmgclP38060 Gm25016-201ENSMUST00000158399 131 ntBASIC16.17■□□□□ 0.18
HmgclP38060 Gm23634-201ENSMUST00000175071 91 ntBASIC16.17■□□□□ 0.18
HmgclP38060 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HmgclP38060 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.17■□□□□ 0.18
HmgclP38060 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HmgclP38060 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HmgclP38060 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HmgclP38060 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HmgclP38060 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HmgclP38060 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HmgclP38060 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HmgclP38060 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HmgclP38060 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HmgclP38060 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HmgclP38060 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HmgclP38060 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HmgclP38060 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HmgclP38060 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.17■□□□□ 0.18
HmgclP38060 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HmgclP38060 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HmgclP38060 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HmgclP38060 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HmgclP38060 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HmgclP38060 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.16■□□□□ 0.18
HmgclP38060 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HmgclP38060 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HmgclP38060 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HmgclP38060 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.16■□□□□ 0.18
HmgclP38060 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.16■□□□□ 0.18
HmgclP38060 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.16■□□□□ 0.18
HmgclP38060 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HmgclP38060 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HmgclP38060 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HmgclP38060 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HmgclP38060 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HmgclP38060 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HmgclP38060 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HmgclP38060 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HmgclP38060 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.16■□□□□ 0.18
HmgclP38060 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HmgclP38060 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HmgclP38060 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HmgclP38060 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HmgclP38060 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HmgclP38060 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.15■□□□□ 0.18
HmgclP38060 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.15■□□□□ 0.18
HmgclP38060 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HmgclP38060 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HmgclP38060 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
HmgclP38060 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HmgclP38060 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
HmgclP38060 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HmgclP38060 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.14■□□□□ 0.18
HmgclP38060 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms