Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nfkb1P25799 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Nfkb1P25799 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nfkb1P25799 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nfkb1P25799 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nfkb1P25799 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nfkb1P25799 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.84■□□□□ 0.29
Nfkb1P25799 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Nfkb1P25799 Gm15372-201ENSMUST00000120729 834 ntBASIC16.84■□□□□ 0.29
Nfkb1P25799 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.84■□□□□ 0.29
Nfkb1P25799 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nfkb1P25799 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nfkb1P25799 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Nfkb1P25799 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.84■□□□□ 0.29
Nfkb1P25799 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nfkb1P25799 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Nfkb1P25799 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Nfkb1P25799 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nfkb1P25799 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nfkb1P25799 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nfkb1P25799 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nfkb1P25799 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nfkb1P25799 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nfkb1P25799 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nfkb1P25799 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nfkb1P25799 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nfkb1P25799 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nfkb1P25799 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nfkb1P25799 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.83■□□□□ 0.28
Nfkb1P25799 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nfkb1P25799 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nfkb1P25799 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nfkb1P25799 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nfkb1P25799 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nfkb1P25799 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nfkb1P25799 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.83■□□□□ 0.28
Nfkb1P25799 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nfkb1P25799 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Nfkb1P25799 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nfkb1P25799 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nfkb1P25799 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nfkb1P25799 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nfkb1P25799 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nfkb1P25799 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nfkb1P25799 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nfkb1P25799 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nfkb1P25799 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nfkb1P25799 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.82■□□□□ 0.28
Nfkb1P25799 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nfkb1P25799 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Rprl3-201ENSMUST00000157400 290 ntBASIC16.82■□□□□ 0.28
Nfkb1P25799 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.82■□□□□ 0.28
Nfkb1P25799 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.82■□□□□ 0.28
Nfkb1P25799 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nfkb1P25799 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.82■□□□□ 0.28
Nfkb1P25799 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nfkb1P25799 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nfkb1P25799 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Gm28659-201ENSMUST00000188013 759 ntBASIC16.81■□□□□ 0.28
Nfkb1P25799 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.81■□□□□ 0.28
Nfkb1P25799 Gm5864-201ENSMUST00000202263 970 ntBASIC16.81■□□□□ 0.28
Nfkb1P25799 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Nfkb1P25799 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Nfkb1P25799 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nfkb1P25799 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms