Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Kcna1P16388 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Kcna1P16388 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Kcna1P16388 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Kcna1P16388 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcna1P16388 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcna1P16388 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcna1P16388 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcna1P16388 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Kcna1P16388 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcna1P16388 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcna1P16388 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcna1P16388 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcna1P16388 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcna1P16388 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.6■□□□□ 0.57
Kcna1P16388 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Kcna1P16388 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.6■□□□□ 0.57
Kcna1P16388 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
Kcna1P16388 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Kcna1P16388 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Kcna1P16388 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.6■□□□□ 0.57
Kcna1P16388 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.6■□□□□ 0.57
Kcna1P16388 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.6■□□□□ 0.57
Kcna1P16388 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcna1P16388 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcna1P16388 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Kcna1P16388 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcna1P16388 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Kcna1P16388 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcna1P16388 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcna1P16388 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Kcna1P16388 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcna1P16388 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Kcna1P16388 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcna1P16388 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcna1P16388 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcna1P16388 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
Kcna1P16388 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Kcna1P16388 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Kcna1P16388 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.59■□□□□ 0.57
Kcna1P16388 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Kcna1P16388 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcna1P16388 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcna1P16388 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Kcna1P16388 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcna1P16388 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Kcna1P16388 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Kcna1P16388 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Kcna1P16388 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Kcna1P16388 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Kcna1P16388 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Kcna1P16388 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Kcna1P16388 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Kcna1P16388 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Kcna1P16388 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Kcna1P16388 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kcna1P16388 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.58■□□□□ 0.56
Kcna1P16388 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Kcna1P16388 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.58■□□□□ 0.56
Kcna1P16388 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.58■□□□□ 0.56
Kcna1P16388 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kcna1P16388 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kcna1P16388 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Kcna1P16388 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kcna1P16388 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Kcna1P16388 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kcna1P16388 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Kcna1P16388 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kcna1P16388 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Kcna1P16388 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Kcna1P16388 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.57■□□□□ 0.56
Kcna1P16388 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Kcna1P16388 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Kcna1P16388 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Kcna1P16388 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Kcna1P16388 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Kcna1P16388 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.57■□□□□ 0.56
Kcna1P16388 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Kcna1P16388 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Kcna1P16388 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Kcna1P16388 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Kcna1P16388 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Kcna1P16388 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Kcna1P16388 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Kcna1P16388 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Kcna1P16388 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Kcna1P16388 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Kcna1P16388 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.57■□□□□ 0.56
Kcna1P16388 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Kcna1P16388 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Kcna1P16388 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Kcna1P16388 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Kcna1P16388 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Kcna1P16388 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Kcna1P16388 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.56■□□□□ 0.56
Kcna1P16388 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Kcna1P16388 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Kcna1P16388 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Kcna1P16388 Gm13312-201ENSMUST00000119631 718 ntBASIC18.56■□□□□ 0.56
Kcna1P16388 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms