Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd44P15379 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd44P15379 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.25■□□□□ 0.35
Cd44P15379 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd44P15379 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd44P15379 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cd44P15379 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.25■□□□□ 0.35
Cd44P15379 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd44P15379 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.24■□□□□ 0.35
Cd44P15379 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.24■□□□□ 0.35
Cd44P15379 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd44P15379 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd44P15379 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.24■□□□□ 0.35
Cd44P15379 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cd44P15379 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd44P15379 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd44P15379 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cd44P15379 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd44P15379 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd44P15379 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cd44P15379 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.24■□□□□ 0.35
Cd44P15379 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cd44P15379 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd44P15379 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd44P15379 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd44P15379 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd44P15379 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd44P15379 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cd44P15379 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd44P15379 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd44P15379 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd44P15379 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd44P15379 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd44P15379 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd44P15379 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd44P15379 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd44P15379 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd44P15379 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd44P15379 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd44P15379 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cd44P15379 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd44P15379 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.23■□□□□ 0.35
Cd44P15379 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.23■□□□□ 0.35
Cd44P15379 Mir5122-201ENSMUST00000175004 89 ntBASIC17.23■□□□□ 0.35
Cd44P15379 Gm44450-201ENSMUST00000199528 114 ntBASIC17.23■□□□□ 0.35
Cd44P15379 Gm7370-201ENSMUST00000219471 767 ntBASIC17.23■□□□□ 0.35
Cd44P15379 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd44P15379 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.23■□□□□ 0.35
Cd44P15379 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cd44P15379 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Cd44P15379 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.23■□□□□ 0.35
Cd44P15379 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd44P15379 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd44P15379 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.22■□□□□ 0.35
Cd44P15379 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd44P15379 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cd44P15379 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cd44P15379 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd44P15379 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd44P15379 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cd44P15379 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd44P15379 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd44P15379 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cd44P15379 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cd44P15379 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.22■□□□□ 0.35
Cd44P15379 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cd44P15379 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.22■□□□□ 0.35
Cd44P15379 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd44P15379 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.22■□□□□ 0.35
Cd44P15379 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.22■□□□□ 0.35
Cd44P15379 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cd44P15379 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.22■□□□□ 0.35
Cd44P15379 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cd44P15379 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cd44P15379 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd44P15379 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd44P15379 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cd44P15379 App-207ENSMUST00000227737 2827 ntBASIC17.21■□□□□ 0.35
Cd44P15379 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd44P15379 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd44P15379 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd44P15379 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cd44P15379 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd44P15379 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd44P15379 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd44P15379 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cd44P15379 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.21■□□□□ 0.35
Cd44P15379 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.21■□□□□ 0.35
Cd44P15379 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.21■□□□□ 0.35
Cd44P15379 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.21■□□□□ 0.35
Cd44P15379 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd44P15379 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cd44P15379 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cd44P15379 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd44P15379 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd44P15379 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cd44P15379 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cd44P15379 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd44P15379 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Cd44P15379 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms