Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.76□□□□□ -0.37
Hoxd3P09027 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 Gm15794-201ENSMUST00000120182 631 ntBASIC12.76□□□□□ -0.37
Hoxd3P09027 Olfr129-201ENSMUST00000122318 993 ntBASIC12.76□□□□□ -0.37
Hoxd3P09027 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Hoxd3P09027 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Hoxd3P09027 Gm28033-201ENSMUST00000184224 96 ntBASIC12.76□□□□□ -0.37
Hoxd3P09027 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.76□□□□□ -0.37
Hoxd3P09027 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Hoxd3P09027 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Hoxd3P09027 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Hoxd3P09027 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Hoxd3P09027 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.76□□□□□ -0.37
Hoxd3P09027 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.76□□□□□ -0.37
Hoxd3P09027 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxd3P09027 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxd3P09027 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Hoxd3P09027 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxd3P09027 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxd3P09027 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Hoxd3P09027 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxd3P09027 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxd3P09027 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.75□□□□□ -0.37
Hoxd3P09027 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxd3P09027 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Hoxd3P09027 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxd3P09027 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.75□□□□□ -0.37
Hoxd3P09027 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxd3P09027 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxd3P09027 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxd3P09027 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxd3P09027 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxd3P09027 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxd3P09027 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Hoxd3P09027 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Hoxd3P09027 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxd3P09027 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxd3P09027 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxd3P09027 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Hoxd3P09027 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxd3P09027 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxd3P09027 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxd3P09027 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxd3P09027 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxd3P09027 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxd3P09027 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxd3P09027 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.74□□□□□ -0.37
Hoxd3P09027 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxd3P09027 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxd3P09027 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxd3P09027 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.74□□□□□ -0.37
Hoxd3P09027 Gm27741-201ENSMUST00000185060 237 ntBASIC12.74□□□□□ -0.37
Hoxd3P09027 Gm28196-201ENSMUST00000187719 640 ntBASIC12.74□□□□□ -0.37
Hoxd3P09027 Gm44882-201ENSMUST00000205702 802 ntBASIC12.74□□□□□ -0.37
Hoxd3P09027 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.74□□□□□ -0.37
Hoxd3P09027 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxd3P09027 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Hoxd3P09027 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.74□□□□□ -0.37
Hoxd3P09027 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxd3P09027 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxd3P09027 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxd3P09027 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxd3P09027 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxd3P09027 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxd3P09027 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxd3P09027 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Hoxd3P09027 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxd3P09027 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxd3P09027 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.74□□□□□ -0.37
Hoxd3P09027 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxd3P09027 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxd3P09027 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxd3P09027 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxd3P09027 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxd3P09027 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxd3P09027 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxd3P09027 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxd3P09027 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxd3P09027 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxd3P09027 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxd3P09027 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxd3P09027 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms