Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sod1P08228 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.38■□□□□ 0.05
Sod1P08228 Gm12260-201ENSMUST00000122447 411 ntBASIC15.38■□□□□ 0.05
Sod1P08228 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Sod1P08228 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sod1P08228 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sod1P08228 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sod1P08228 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Sod1P08228 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sod1P08228 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sod1P08228 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sod1P08228 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sod1P08228 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Sod1P08228 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sod1P08228 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Sod1P08228 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sod1P08228 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Sod1P08228 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.38■□□□□ 0.05
Sod1P08228 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sod1P08228 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sod1P08228 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sod1P08228 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sod1P08228 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Sod1P08228 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.37■□□□□ 0.05
Sod1P08228 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sod1P08228 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Sod1P08228 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.37■□□□□ 0.05
Sod1P08228 Gm14494-201ENSMUST00000118786 435 ntBASIC15.37■□□□□ 0.05
Sod1P08228 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sod1P08228 Gm9727-201ENSMUST00000161387 555 ntBASIC15.37■□□□□ 0.05
Sod1P08228 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.37■□□□□ 0.05
Sod1P08228 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.37■□□□□ 0.05
Sod1P08228 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sod1P08228 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sod1P08228 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sod1P08228 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.37■□□□□ 0.05
Sod1P08228 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sod1P08228 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sod1P08228 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sod1P08228 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sod1P08228 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.36■□□□□ 0.05
Sod1P08228 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sod1P08228 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sod1P08228 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sod1P08228 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sod1P08228 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sod1P08228 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sod1P08228 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sod1P08228 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.36■□□□□ 0.05
Sod1P08228 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Sod1P08228 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.36■□□□□ 0.05
Sod1P08228 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sod1P08228 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.36■□□□□ 0.05
Sod1P08228 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Sod1P08228 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Sod1P08228 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.36■□□□□ 0.05
Sod1P08228 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sod1P08228 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sod1P08228 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Sod1P08228 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.36■□□□□ 0.05
Sod1P08228 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Sod1P08228 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sod1P08228 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sod1P08228 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sod1P08228 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Sod1P08228 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Sod1P08228 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sod1P08228 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sod1P08228 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sod1P08228 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sod1P08228 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sod1P08228 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sod1P08228 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.35■□□□□ 0.05
Sod1P08228 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sod1P08228 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sod1P08228 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sod1P08228 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sod1P08228 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.35■□□□□ 0.05
Sod1P08228 Gm4995-201ENSMUST00000117247 432 ntBASIC15.35■□□□□ 0.05
Sod1P08228 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.35■□□□□ 0.05
Sod1P08228 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Sod1P08228 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sod1P08228 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.35■□□□□ 0.05
Sod1P08228 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.35■□□□□ 0.05
Sod1P08228 Gm18622-201ENSMUST00000219361 595 ntBASIC15.35■□□□□ 0.05
Sod1P08228 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Sod1P08228 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sod1P08228 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sod1P08228 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sod1P08228 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sod1P08228 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Sod1P08228 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sod1P08228 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sod1P08228 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sod1P08228 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sod1P08228 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sod1P08228 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sod1P08228 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.34■□□□□ 0.05
Sod1P08228 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.34■□□□□ 0.05
Sod1P08228 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms