Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Matn4O89029 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.51■□□□□ 0.07
Matn4O89029 Odf3b-204ENSMUST00000227834 930 ntBASIC15.51■□□□□ 0.07
Matn4O89029 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Matn4O89029 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Matn4O89029 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Matn4O89029 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Matn4O89029 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Matn4O89029 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Matn4O89029 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Matn4O89029 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Matn4O89029 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
Matn4O89029 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Matn4O89029 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Matn4O89029 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Matn4O89029 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Matn4O89029 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Matn4O89029 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.5■□□□□ 0.07
Matn4O89029 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.5■□□□□ 0.07
Matn4O89029 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Matn4O89029 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.5■□□□□ 0.07
Matn4O89029 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.5■□□□□ 0.07
Matn4O89029 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Matn4O89029 Prob1-201ENSMUST00000097619 3021 ntBASIC15.5■□□□□ 0.07
Matn4O89029 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.5■□□□□ 0.07
Matn4O89029 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.5■□□□□ 0.07
Matn4O89029 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn4O89029 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn4O89029 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn4O89029 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn4O89029 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn4O89029 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Matn4O89029 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn4O89029 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn4O89029 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn4O89029 Gm3375-201ENSMUST00000203929 796 ntBASIC15.49■□□□□ 0.07
Matn4O89029 Gm18115-201ENSMUST00000221209 621 ntBASIC15.49■□□□□ 0.07
Matn4O89029 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.49■□□□□ 0.07
Matn4O89029 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn4O89029 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn4O89029 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn4O89029 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Matn4O89029 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn4O89029 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn4O89029 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn4O89029 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.49■□□□□ 0.07
Matn4O89029 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Matn4O89029 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn4O89029 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Matn4O89029 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Matn4O89029 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Matn4O89029 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Matn4O89029 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Matn4O89029 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.48■□□□□ 0.07
Matn4O89029 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Matn4O89029 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.48■□□□□ 0.07
Matn4O89029 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Matn4O89029 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Matn4O89029 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.48■□□□□ 0.07
Matn4O89029 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Matn4O89029 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Matn4O89029 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Matn4O89029 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Matn4O89029 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.48■□□□□ 0.07
Matn4O89029 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Matn4O89029 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Matn4O89029 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Matn4O89029 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Matn4O89029 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Matn4O89029 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Matn4O89029 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Matn4O89029 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Matn4O89029 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Matn4O89029 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Matn4O89029 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms