Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Setdb1O88974 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Setdb1O88974 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Setdb1O88974 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Setdb1O88974 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Setdb1O88974 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Setdb1O88974 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.99■□□□□ 0.79
Setdb1O88974 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Setdb1O88974 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.99■□□□□ 0.79
Setdb1O88974 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Setdb1O88974 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.99■□□□□ 0.79
Setdb1O88974 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.99■□□□□ 0.79
Setdb1O88974 Gm5186-201ENSMUST00000218781 920 ntBASIC19.99■□□□□ 0.79
Setdb1O88974 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Setdb1O88974 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.99■□□□□ 0.79
Setdb1O88974 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Setdb1O88974 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Setdb1O88974 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Setdb1O88974 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Setdb1O88974 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Setdb1O88974 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Setdb1O88974 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Setdb1O88974 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Setdb1O88974 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Setdb1O88974 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Setdb1O88974 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Setdb1O88974 Gm25990-201ENSMUST00000102440 86 ntBASIC19.98■□□□□ 0.79
Setdb1O88974 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Setdb1O88974 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.98■□□□□ 0.79
Setdb1O88974 Gm7230-201ENSMUST00000173026 815 ntBASIC19.98■□□□□ 0.79
Setdb1O88974 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Setdb1O88974 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.98■□□□□ 0.79
Setdb1O88974 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Setdb1O88974 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Setdb1O88974 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Setdb1O88974 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Setdb1O88974 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Setdb1O88974 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Setdb1O88974 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.97■□□□□ 0.79
Setdb1O88974 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.97■□□□□ 0.79
Setdb1O88974 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Setdb1O88974 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Setdb1O88974 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Setdb1O88974 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Setdb1O88974 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Setdb1O88974 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Setdb1O88974 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.97■□□□□ 0.79
Setdb1O88974 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Setdb1O88974 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Setdb1O88974 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Setdb1O88974 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Setdb1O88974 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Setdb1O88974 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Setdb1O88974 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Setdb1O88974 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Setdb1O88974 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Setdb1O88974 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Setdb1O88974 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.96■□□□□ 0.79
Setdb1O88974 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.96■□□□□ 0.79
Setdb1O88974 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Setdb1O88974 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Setdb1O88974 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Setdb1O88974 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Setdb1O88974 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Setdb1O88974 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.96■□□□□ 0.79
Setdb1O88974 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.96■□□□□ 0.79
Setdb1O88974 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Setdb1O88974 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.96■□□□□ 0.79
Setdb1O88974 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Setdb1O88974 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Setdb1O88974 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Setdb1O88974 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Setdb1O88974 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Setdb1O88974 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Setdb1O88974 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Setdb1O88974 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Setdb1O88974 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Setdb1O88974 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Setdb1O88974 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Setdb1O88974 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Setdb1O88974 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Setdb1O88974 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Setdb1O88974 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Setdb1O88974 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Setdb1O88974 Gm14140-201ENSMUST00000119999 995 ntBASIC19.95■□□□□ 0.78
Setdb1O88974 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Setdb1O88974 Gm9727-201ENSMUST00000161387 555 ntBASIC19.95■□□□□ 0.78
Setdb1O88974 Gm10175-201ENSMUST00000086013 645 ntBASIC19.95■□□□□ 0.78
Setdb1O88974 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Setdb1O88974 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Setdb1O88974 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Setdb1O88974 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Setdb1O88974 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Setdb1O88974 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Setdb1O88974 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Setdb1O88974 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Setdb1O88974 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC19.94■□□□□ 0.78
Setdb1O88974 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Setdb1O88974 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.94■□□□□ 0.78
Setdb1O88974 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms