Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim1O70400 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim1O70400 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.2■□□□□ 0.18
Pdlim1O70400 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim1O70400 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim1O70400 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pdlim1O70400 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pdlim1O70400 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.19■□□□□ 0.18
Pdlim1O70400 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim1O70400 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
Pdlim1O70400 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.19■□□□□ 0.18
Pdlim1O70400 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim1O70400 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.19■□□□□ 0.18
Pdlim1O70400 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim1O70400 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pdlim1O70400 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Pdlim1O70400 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim1O70400 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pdlim1O70400 Gm27704-201ENSMUST00000185094 107 ntBASIC16.19■□□□□ 0.18
Pdlim1O70400 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.19■□□□□ 0.18
Pdlim1O70400 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.19■□□□□ 0.18
Pdlim1O70400 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim1O70400 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim1O70400 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pdlim1O70400 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim1O70400 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pdlim1O70400 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim1O70400 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim1O70400 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim1O70400 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim1O70400 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pdlim1O70400 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim1O70400 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim1O70400 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.19■□□□□ 0.18
Pdlim1O70400 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim1O70400 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim1O70400 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim1O70400 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim1O70400 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Pdlim1O70400 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim1O70400 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim1O70400 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim1O70400 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Pdlim1O70400 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.18■□□□□ 0.18
Pdlim1O70400 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim1O70400 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim1O70400 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim1O70400 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim1O70400 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim1O70400 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim1O70400 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim1O70400 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim1O70400 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim1O70400 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pdlim1O70400 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim1O70400 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim1O70400 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim1O70400 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim1O70400 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pdlim1O70400 Gm15794-201ENSMUST00000120182 631 ntBASIC16.17■□□□□ 0.18
Pdlim1O70400 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim1O70400 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim1O70400 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim1O70400 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim1O70400 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.17■□□□□ 0.18
Pdlim1O70400 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pdlim1O70400 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pdlim1O70400 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim1O70400 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pdlim1O70400 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Gm27742-201ENSMUST00000184667 60 ntBASIC16.16■□□□□ 0.18
Pdlim1O70400 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Pdlim1O70400 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim1O70400 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim1O70400 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim1O70400 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim1O70400 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim1O70400 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.15■□□□□ 0.18
Pdlim1O70400 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms