Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.04■□□□□ 0.8
Mmp8O70138 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp8O70138 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp8O70138 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Mmp8O70138 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Mmp8O70138 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.03■□□□□ 0.8
Mmp8O70138 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
Mmp8O70138 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp8O70138 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.03■□□□□ 0.8
Mmp8O70138 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp8O70138 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp8O70138 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp8O70138 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp8O70138 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp8O70138 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC20.03■□□□□ 0.8
Mmp8O70138 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp8O70138 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC20.03■□□□□ 0.8
Mmp8O70138 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp8O70138 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp8O70138 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp8O70138 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp8O70138 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC20.02■□□□□ 0.8
Mmp8O70138 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Mmp8O70138 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp8O70138 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
Mmp8O70138 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp8O70138 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp8O70138 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Mmp8O70138 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp8O70138 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Mmp8O70138 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Mmp8O70138 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.02■□□□□ 0.79
Mmp8O70138 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Mmp8O70138 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Mmp8O70138 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp8O70138 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp8O70138 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp8O70138 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp8O70138 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp8O70138 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp8O70138 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp8O70138 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.01■□□□□ 0.79
Mmp8O70138 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.01■□□□□ 0.79
Mmp8O70138 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp8O70138 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp8O70138 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp8O70138 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp8O70138 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp8O70138 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp8O70138 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp8O70138 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp8O70138 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Mmp8O70138 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp8O70138 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp8O70138 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp8O70138 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Mmp8O70138 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp8O70138 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp8O70138 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Mmp8O70138 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp8O70138 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20■□□□□ 0.79
Mmp8O70138 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20■□□□□ 0.79
Mmp8O70138 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp8O70138 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC20■□□□□ 0.79
Mmp8O70138 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Mmp8O70138 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp8O70138 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp8O70138 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp8O70138 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp8O70138 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp8O70138 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp8O70138 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp8O70138 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp8O70138 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.99■□□□□ 0.79
Mmp8O70138 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.99■□□□□ 0.79
Mmp8O70138 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.99■□□□□ 0.79
Mmp8O70138 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp8O70138 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp8O70138 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp8O70138 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp8O70138 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp8O70138 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp8O70138 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp8O70138 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp8O70138 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp8O70138 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp8O70138 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp8O70138 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp8O70138 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Mmp8O70138 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp8O70138 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp8O70138 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp8O70138 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp8O70138 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp8O70138 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Mmp8O70138 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp8O70138 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp8O70138 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp8O70138 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp8O70138 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms